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Protein Overview: nas-10

General Information:
Name(s) found: nas-10 / CE03479 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003529 locus:nas-10 Zinc metalloproteinase nas-10 status:Partially_confirmed UniProt:Q21388 protein_id:CAA91996.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: astacin activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTITDLKTI NRKQKQAYLQ EKLICSRHCW LTHTTSKHIN IQWTTLIPHI RCRGFNNGPH  60
   61 PNSRPGSRPN SPLGDIFGNI NGMVKGITDQ IGKIAQGLDV NNDLGKMAHG PPPPQSEWVE 120
  121 HARRFCRRFP GHPKCRGQLP QFNDIGSMLN GILVDSGKWL PKVPFINIRD PLSGINSDLK 180
  181 NALNGIQVQF GQISQQFANN IRNICQQMNC KQQQQKNVQM KQAILKQTVD FEKKVFGNNV 240
  241 ADKMNLRFDR TLQLKQALLE KAQLKGVVAP EDNGVFDKDL LLTETQANFM LNELGKGGEG 300
  301 AIPMPGSAKA KRASIFFEQN LIQKWPSTSP IPYTFDSSLD NLDQNDVRGA ISEIEQKTCI 360
  361 RFKYFASPPK GNHINYQKVN SPSFCGLSYI GRVEPANPVY LSFQCGNGRG IAVHETMHAL 420
  421 GVNHQHLRMD RDKHIKVDWS NINPQQYDAF VVADSKLYTT YGVKYAYDSI MHYNAYTGAV 480
  481 NIAKPTMIPL VNQQANIGLL GQRAKMSNAD VEILNKMYCK SAGCDDKNVY CGAWALQDLC 540
  541 NNPNHNVWMR SNCRKSCNFC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] deduced N/A No confident structure predictions are available.
    2 View Details [248..463] PSI-BLAST 33.09691 Gelatinase A (MMP-2); Gelatinase A (MMP-2), C-terminal domain; Gelatinase A; Gelatinase A (MMP-2) type II modules
    3 View Details [464..560] PSI-BLAST 41.69897 STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • receptor activity
    		•  1.35763516872513 bayes_pls_golite062009
  • binding
    		•  0.827429924935597 bayes_pls_golite062009
  • protein binding
    		•  0.497523852978755 bayes_pls_golite062009
  • signal transducer activity
    		•  0.420287665033567 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.420287665033567 bayes_pls_golite062009
  • metallopeptidase activity
    		•  0.201462065243776 bayes_pls_golite062009
  • peptidase activity
    		•  0.142007397056454 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.136560284009247 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle