| Protein: | nas-10 |
| Organism: | Caenorhabditis elegans |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-10.
| Description | E-value | Query Range |
Subject Range |
|
|
545.0 | [0..59] | [560..18] |
|
Region A: Residues: [1-247] |
1 11 21 31 41 51
| | | | | |
1 MYTITDLKTI NRKQKQAYLQ EKLICSRHCW LTHTTSKHIN IQWTTLIPHI RCRGFNNGPH 60
61 PNSRPGSRPN SPLGDIFGNI NGMVKGITDQ IGKIAQGLDV NNDLGKMAHG PPPPQSEWVE 120
121 HARRFCRRFP GHPKCRGQLP QFNDIGSMLN GILVDSGKWL PKVPFINIRD PLSGINSDLK 180
181 NALNGIQVQF GQISQQFANN IRNICQQMNC KQQQQKNVQM KQAILKQTVD FEKKVFGNNV 240
241 ADKMNLR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [248-463] |
1 11 21 31 41 51
| | | | | |
1 FDRTLQLKQA LLEKAQLKGV VAPEDNGVFD KDLLLTETQA NFMLNELGKG GEGAIPMPGS 60
61 AKAKRASIFF EQNLIQKWPS TSPIPYTFDS SLDNLDQNDV RGAISEIEQK TCIRFKYFAS 120
121 PPKGNHINYQ KVNSPSFCGL SYIGRVEPAN PVYLSFQCGN GRGIAVHETM HALGVNHQHL 180
181 RMDRDKHIKV DWSNINPQQY DAFVVADSKL YTTYGV
|
| Detection Method: | |
| Confidence: | 33.09691 |
| Match: | 1ck7A |
| Description: | Gelatinase A (MMP-2); Gelatinase A (MMP-2), C-terminal domain; Gelatinase A; Gelatinase A (MMP-2) type II modules |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 1.35763516872513 | bayes_pls_golite062009 |
| binding | 0.827429924935597 | bayes_pls_golite062009 |
| protein binding | 0.497523852978755 | bayes_pls_golite062009 |
| signal transducer activity | 0.420287665033567 | bayes_pls_golite062009 |
| molecular transducer activity | 0.420287665033567 | bayes_pls_golite062009 |
| metallopeptidase activity | 0.201462065243776 | bayes_pls_golite062009 |
| peptidase activity | 0.142007397056454 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.136560284009247 | bayes_pls_golite062009 |
|
Region A: Residues: [464-560] |
1 11 21 31 41 51
| | | | | |
1 KYAYDSIMHY NAYTGAVNIA KPTMIPLVNQ QANIGLLGQR AKMSNADVEI LNKMYCKSAG 60
61 CDDKNVYCGA WALQDLCNNP NHNVWMRSNC RKSCNFC
|
| Detection Method: | |
| Confidence: | 41.69897 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
