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Protein Overview: CE03255

General Information:
Name(s) found: CE03255 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00009035 status:Partially_confirmed UniProt:Q19699 protein_id:CAA92735.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 710 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    carbohydrate metabolic process [IEALink to PubMed article]
    carbohydrate biosynthetic process [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    metabolic process [IEALink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    purine base biosynthetic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: sugar binding [IEALink to PubMed article]
    glutamine-fructose-6-phosphate transaminase (isomerizing) activity [IEALink to PubMed article]
    amidophosphoribosyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGIFAYLNF LAPKKRSEIV DILVQGLQRM EYRGYDSAGI AIDGSNDIEN PHSKIALLRK  60
   61 RGKVSVLNDY IKENNEKLNM DMEYNIHCGI AHTRWATHGS PRDVNSHPHR SNDNNEFLVV 120
  121 HNGIITNYRE IKEYLEKKGH KFESETDTEV IAKLTQHVHD RYPDFSFRQL VETVIQQLEG 180
  181 AFALAFKSSR FPGQLVASRR GSPLLVGIKS NSTLHTSHFP VSYSKGRCFM SNNATHLREE 240
  241 TSFVETPNNI LDLSIAVRNP SGSAKLPDNN STTRPFDSTD FEVEYFIASD AAAIIEHTKQ 300
  301 VLFLEDDDVA FVEDGSLTIH RISRHADSGE QKREVQLLEL EIQEIMKGSY KTFMQKEIFE 360
  361 QPESVVNTMR GRVLPSGQVV LGGLKEYLPA IKRCRRLIMV ACGTSYHSAI ACRQVLEELS 420
  421 ELPVVVELAS DFLDRETPIF RNDVCLFISQ SGETADTLMA LRYCKPRGAL TIGVTNTVGS 480
  481 SIGRESHCGI HINAGPEIGV ASTKAYTSQI VSLLLFALTI SEDRISKMKR RAEIIDALNN 540
  541 LPILIRDVLD LDDQVLKIAE QIYKDKSLLI MGRGLNFATC LEGALKIKEL SYMHCEGIMS 600
  601 GELKHGPLAM VDEFLSICMV VCNDHVYKKS LNALQQVVAR KGAPIIIADS SVPESDLAGM 660
  661 KHVLRVPRTV DCVQNILTVI PLQLLSYHIA ELNGANVDRP RNLAKSVTVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] PSI-BLAST 50.39794 Glutaminase domain of glucosamine 6-phosphate synthase complexed with glutamate
    2 View Details [233..400] FFAS03 3.36 "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain
    3 View Details [401..710] PSI-BLAST 90.221849 No description for 2pocA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  1.34295853726897 bayes_pls_golite062009
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.16226272745141 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.798789250029517 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.759765292911898 bayes_pls_golite062009
  • binding
    		•  0.541510243044181 bayes_pls_golite062009
  • transferase activity
    		•  0.526806728662348 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle