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Protein Overview: sld5

General Information:
Name(s) found: sld5 / SPBP4H10.21c [Sanger Pombe]
Description(s) found:
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  • gi|74625370|sp|Q9P7C8.1|SLD5_SCHPO RecName: Full=DNA replication complex GINS protein sld5 [NCBI NR]
  • gi|7363198|emb|CAB83179.1| GINS complex subunit Sld5 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112987|ref|NP_596195.1| GINS complex subunit Sld5 [Schizosaccharomyces pombe] [NCBI NR]
  • GINS complex subunit Sld5 [Sanger Pombe]
  • DNA replication complex GINS protein sld5 OS=Schizosaccharomyces pombe GN=sld5 PE=1 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YDR489W: Q9P7C8; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPBP4H10.21c protein [4896.FASTAC]
  • |||GINS complex (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|7363198|emb|CAB83179.1| SPBP4H10.21c [Schizosaccharomyces pombe] [nrdb_11152004_Chlamydomonas]
  • |||GINS complex subunit |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (Q9P7C8) Hypothetical protein [pompep4896_normal_reversed]
  • |sld5||GINS complex subunit Sld5|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBP4H10.21c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBP4H10.21c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • DNA replication complex GINS protein sld5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sld5 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 214 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    DNA replication preinitiation complex [IC]
    GINS complex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA replication initiation [ICLink to PubMed article]
    DNA strand elongation involved in DNA replication [TASLink to PubMed article]
    chromosome segregation [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWDADDLLI EPTTEVENDY EDLCTQWVNE RMAPDLLPFA EEIVSRVLDR IEAQRETLQL  60
   61 AIGTSSATSY RSVLMQTELE RVKFVLRSYM RTRINKIDKY AQYIQSHPNL LLYLSSPERQ 120
  121 YLLRHQQIVH RHYMDSFLRE VPAKMNKLDD KVGNLSMVAS PDMDTAVFCV VNESVEENFR 180
  181 VSENEYITLD KGDVLILRYS VISDYLRLGV VSLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 61.69897 No description for 2e9xD was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3'-5' DNA helicase activity
    		•  3.30007058745861 bayes_pls_golite062009
  • DNA helicase activity
    		•  2.7662250039458 bayes_pls_golite062009
  • binding
    		•  1.27082628880017 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2336233528067 bayes_pls_golite062009
  • helicase activity
    		•  1.2110072302388 bayes_pls_golite062009
  • protein binding
    		•  0.870806795328732 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.406116199163083 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.350000641617868 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.33576520693158 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.333445385039412 bayes_pls_golite062009
  • catalytic activity
    		•  0.161911144249814 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle