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Protein Overview: arm1

General Information:
Name(s) found: arm1 / SPBC1215.02c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • NatB N-acetyltransferase complex non catalytic subunit Arm1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 811 amino acids

    Gene Ontology:
    Cellular Component: NatB complex [ISSLink to PubMed article]
    cytoplasm [NASLink to PubMed article]
    cytosol [IDALink to PubMed article]
    intracellular [ISSLink to PubMed article]
    Biological Process: mitochondrion inheritance [ISSLink to PubMed article]
    barrier septum formation [NASLink to PubMed article]
    N-terminal peptidyl-methionine acetylation [ISSLink to PubMed article]
    endocytosis [NASLink to PubMed article]
    actin cytoskeleton organization [ISSLink to PubMed article]
    mitochondrion organization [NASLink to PubMed article]
    actin filament bundle assembly [NASLink to PubMed article]
    Molecular Function: actin binding [ISSLink to PubMed article]
    peptide alpha-N-acetyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSGSKEST IVYSALSLAQ AGRGPEALAL LEPLKSTPIN SLELLDIIQA VYDDQKKGEE  60
   61 SFVFWEKFLQ TYGKQEKNLL AYFKASIRIK SLSHQRKAAV ELQKNFPSRK HTLWVISSLY 120
  121 LLSKKSENEV EQRLLKALAE KTAKLIFEKP TGYIDSCEEF HLYLDVLLLV GDKDRALDAL 180
  181 IHQDADRFVD ADADLLLRKL ELLASCARWD SLFTFSLSLF QTGNTDWKVC KALLDSASND 240
  241 DSKLVPLKDC ILKALSTSST KRNLHLLWIE ASARFFPEEH ESALLGYIKK LYMKPIVFED 300
  301 LRPYLLKLNV DAQHRLLDAF KLADLGESNE SQKVDKLYAE VLLLKIHFLL FESFTAESVV 360
  361 DYVRRCFVAF EKGLSLSKGL LPTDFTHGYE ALLLAVHSLI YMWEGNKDLK PAEKQALIFD 420
  421 AICLLEKGIT YSQHNFHLKL PLIRLYLLLD GGFPAAAKVY DTMSIKQIQN DTLDHYLLTR 480
  481 ATTYYPSSVT SHYINSSLKI YGSNEFETPE MISMAYEDGA YSQIEDMRNF RSRLDHSTWK 540
  541 SISLVERARI HYLTAFKPPK QYLPKCSSPK DNRDLKVFAD YGSDKLPTVE ESLRNSPKPD 600
  601 TLWIHLTVIG HSLVQDSIVN GDFEKAVLSA KEMEVLCENN DLSKQLTSEE IVHMKLLIQL 660
  661 GLLSVKVKNG DYENSSFETI ENLIESFDYE NSTPLSQLTK YTEIINDLIT CLNSFLYHVS 720
  721 ATKKKEFTRQ YQLLKNISSN KLGSISGITK HKKKAARKYV SELLSNSWLS NLSETQVPYD 780
  781 PKFAKQVGEG MIDSYIQTTD AVSKLPKFVK F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..332] PSI-BLAST 46.0 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [333..463] PSI-BLAST 4.0 Crystal structure of the N-terminal domain of human SMG7
    3 View Details [464..519] deduced N/A No confident structure predictions are available.
    4 View Details [520..619] deduced N/A No confident structure predictions are available.
    5 View Details [620..811] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.93197588899451 bayes_pls_golite062009
  • protein binding
    		•  1.83529176977066 bayes_pls_golite062009
  • procollagen-proline 4-dioxygenase activity
    		•  0.482467028485988 bayes_pls_golite062009
  • procollagen-proline dioxygenase activity
    		•  0.482467028485988 bayes_pls_golite062009
  • peptidyl-proline dioxygenase activity
    		•  0.482467028485988 bayes_pls_golite062009
  • peptidyl-proline 4-dioxygenase activity
    		•  0.482467028485988 bayes_pls_golite062009
  • signal sequence binding
    		•  0.37451389163924 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  0.370543377804206 bayes_pls_golite062009
  • acetyltransferase activity
    		•  0.246297460720215 bayes_pls_golite062009
  • transferase activity
    		•  0.127854220687373 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.111824723419204 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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