YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: arm1
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSGSKEST IVYSALSLAQ AGRGPEALAL LEPLKSTPIN SLELLDIIQA VYDDQKKGEE  60
   61 SFVFWEKFLQ TYGKQEKNLL AYFKASIRIK SLSHQRKAAV ELQKNFPSRK HTLWVISSLY 120
  121 LLSKKSENEV EQRLLKALAE KTAKLIFEKP TGYIDSCEEF HLYLDVLLLV GDKDRALDAL 180
  181 IHQDADRFVD ADADLLLRKL ELLASCARWD SLFTFSLSLF QTGNTDWKVC KALLDSASND 240
  241 DSKLVPLKDC ILKALSTSST KRNLHLLWIE ASARFFPEEH ESALLGYIKK LYMKPIVFED 300
  301 LRPYLLKLNV DAQHRLLDAF KLADLGESNE SQKVDKLYAE VLLLKIHFLL FESFTAESVV 360
  361 DYVRRCFVAF EKGLSLSKGL LPTDFTHGYE ALLLAVHSLI YMWEGNKDLK PAEKQALIFD 420
  421 AICLLEKGIT YSQHNFHLKL PLIRLYLLLD GGFPAAAKVY DTMSIKQIQN DTLDHYLLTR 480
  481 ATTYYPSSVT SHYINSSLKI YGSNEFETPE MISMAYEDGA YSQIEDMRNF RSRLDHSTWK 540
  541 SISLVERARI HYLTAFKPPK QYLPKCSSPK DNRDLKVFAD YGSDKLPTVE ESLRNSPKPD 600
  601 TLWIHLTVIG HSLVQDSIVN GDFEKAVLSA KEMEVLCENN DLSKQLTSEE IVHMKLLIQL 660
  661 GLLSVKVKNG DYENSSFETI ENLIESFDYE NSTPLSQLTK YTEIINDLIT CLNSFLYHVS 720
  721 ATKKKEFTRQ YQLLKNISSN KLGSISGITK HKKKAARKYV SELLSNSWLS NLSETQVPYD 780
  781 PKFAKQVGEG MIDSYIQTTD AVSKLPKFVK F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle