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Protein Overview: SPBC31F10.16

General Information:
Name(s) found: SPBC31F10.16 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • ChAPs family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 679 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    trans-Golgi network transport vesicle [NASLink to PubMed article]
    cytosol [IDALink to PubMed article]
    clathrin-coated vesicle [ISSLink to PubMed article]
    Biological Process: Golgi to plasma membrane transport [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSFFKDIP EFLETRVNES LDARSKSIAQ FKELGPPDQV NTIKVNAKNP SKEWGKDQDK  60
   61 SLFTKLFTPI ETLTFYVLLT SSKVGTYHFV SGVDASSSAS LAAYLNTLSY SLDKSQQWFG 120
  121 KGNAWRVSHG VYCCYNVFSQ VDVRVEAKIP GGVDTYAIDE NGQKHIVDAR MWTEAYMSEV 180
  181 LRSLLYSDDT NSRFAGHRRF NPIPNPDAEL RFFEAAEQLF TLGYTLGSSS EVRVPTHVNN 240
  241 HLVRGIFAYL KQTCRYSAAL NLFEKLRVSI PEVSVLLAEL YLLMDHEVHA VRILHDSLLK 300
  301 QRMSASLLIV QVKFLISKER YDLALICAKR AVHASPSEFA TWACLADVYL HLEDFKSALL 360
  361 ALNSCPMYTY YERDAYPLPP SARAHLPFPV NFPKEELEVE NNAQNGYTVS TEITDPYLAR 420
  421 LPSPSLRGTF AKAYEMLTLI CAKIGWDELL RVRSAVFVME EEYRSLNDIT EGNASPDQNE 480
  481 VAEESVAEEV VGLDKPETSV GSLPKNATVQ SKRLCERWLD NLFMVLYEDL RVFTIWRAEY 540
  541 THFKSQGLAY RKAPAEWEIL GEVAFRLHHR VEAVEAFCAC LESMFSFKAW KTLLIIYSED 600
  601 NNIELVLTAI AKLTLYNYRW YQEYSPFLLE QMKNRIMQDG ALKMKSILAS TRLDPYILNL 660
  661 IHKLYFEWAI AFQIPGHEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] deduced N/A No confident structure predictions are available.
    2 View Details [94..246] PSI-BLAST 20.39794 No description for 2c0lA was found.
    3 View Details [247..679] PSI-BLAST 42.221849 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  2.57186536498101 bayes_pls_golite062009
  • signal sequence binding
    		•  2.03820678175828 bayes_pls_golite062009
  • protein binding
    		•  1.65083457326273 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.02070055347338 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.01193875360949 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.95641230808714 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  0.83187710003457 bayes_pls_golite062009
  • DNA binding
    		•  0.80346414607277 bayes_pls_golite062009
  • transcription factor activity
    		•  0.134824164012026 bayes_pls_golite062009
  • RNA binding
    		•  0.0901814112095951 bayes_pls_golite062009
  • syntaxin binding
    		•  0.0598606763736398 bayes_pls_golite062009
  • peroxisome targeting sequence binding
    		•  0.0468412220974996 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle