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Protein Overview: atg9

General Information:
Name(s) found: atg9 / SPBC15D4.07c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • autophagy associated protein Atg9 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 702 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    integral to membrane [ISSLink to PubMed article]
    Biological Process: autophagic vacuole assembly [ISSLink to PubMed article]
    autophagy [IMPLink to PubMed article]
    CVT pathway [ISSLink to PubMed article]
    macroautophagy [IC]
    cellular response to nitrogen starvation [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYQPAQNKK QYDDLADIEA QNNVPNTQEV LEAWQESLDS DEDESSPLEE SNGFTISEHD  60
   61 DFVKSVPRKN NPTDLLYSGK LLDSDEPPSV HGNSSKVPSK HPSPSFPETT SLRNLQNGSK 120
  121 QKPALPNFND PHFYNEDVTR SGHPNRSIYT QLPRNEFSNA RVLWNRLSAR DRVLWRWANV 180
  181 ENLDSFLQQV YTYYTGKGLS CIIVHRLFQI LTVSFVIGFT TFITSCIDWP AVTPHGSLAG 240
  241 VTKSQCIAQM SPITYLVLWL FLSFLLALWI YYLTDIPRLW QMREFYIHAL KIATADMPTV 300
  301 SWQRVLYRLL KLKNVNALTA EDGRVVSLHN MKRLDAYAIA NRIMRKDNYF IALINNGIIN 360
  361 IELPLLHRRI LTHTTEWNIN WCIFNFVFDE QGQLRSAFRN PNSRKRLSEE LRRRFIVAGF 420
  421 LNCLFAPIVA IYLVIHNFFR YFNEYHKNPG ALSTRRYTPL ALWTFREYNE LQHFFDERIN 480
  481 DSYAAASHYV SQFPDFNMIR LFKYISFILG SFTAILVIIT VFDPELMVTF EITKDRSVLF 540
  541 YLGLFGSLIA VSRSIIPDET LVFAPEKALR RVITFTHYMP GWWSDNMHSK AVQQEFCSLY 600
  601 SYRIVNLLWE ILGILLTPVL LFFTFPSCSQ DIVDFFREHT INVEGVGYVC SYAVFQDNPP 660
  661 YESVASLVQS RKISPLIQNK PELSRISFYE QFNTEAPRRD LR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] MSA 15.050996 View MSA. No confident structure predictions are available.
    2 View Details [182..318] MSA 1.047975 View MSA. No confident structure predictions are available.
    3 View Details [319..469] deduced N/A No confident structure predictions are available.
    4 View Details [470..556] MSA 1.049987 View MSA. No confident structure predictions are available.
    5 View Details [557..702] MSA 3.051956 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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