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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: atg9
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYQPAQNKK QYDDLADIEA QNNVPNTQEV LEAWQESLDS DEDESSPLEE SNGFTISEHD  60
   61 DFVKSVPRKN NPTDLLYSGK LLDSDEPPSV HGNSSKVPSK HPSPSFPETT SLRNLQNGSK 120
  121 QKPALPNFND PHFYNEDVTR SGHPNRSIYT QLPRNEFSNA RVLWNRLSAR DRVLWRWANV 180
  181 ENLDSFLQQV YTYYTGKGLS CIIVHRLFQI LTVSFVIGFT TFITSCIDWP AVTPHGSLAG 240
  241 VTKSQCIAQM SPITYLVLWL FLSFLLALWI YYLTDIPRLW QMREFYIHAL KIATADMPTV 300
  301 SWQRVLYRLL KLKNVNALTA EDGRVVSLHN MKRLDAYAIA NRIMRKDNYF IALINNGIIN 360
  361 IELPLLHRRI LTHTTEWNIN WCIFNFVFDE QGQLRSAFRN PNSRKRLSEE LRRRFIVAGF 420
  421 LNCLFAPIVA IYLVIHNFFR YFNEYHKNPG ALSTRRYTPL ALWTFREYNE LQHFFDERIN 480
  481 DSYAAASHYV SQFPDFNMIR LFKYISFILG SFTAILVIIT VFDPELMVTF EITKDRSVLF 540
  541 YLGLFGSLIA VSRSIIPDET LVFAPEKALR RVITFTHYMP GWWSDNMHSK AVQQEFCSLY 600
  601 SYRIVNLLWE ILGILLTPVL LFFTFPSCSQ DIVDFFREHT INVEGVGYVC SYAVFQDNPP 660
  661 YESVASLVQS RKISPLIQNK PELSRISFYE QFNTEAPRRD LR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle