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Protein Overview: atp4

General Information:
Name(s) found: atp4 / SPBC1604.07 [Sanger Pombe]
Description(s) found:
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  • pir||T39507 probable ATP synthase subunit precursor, mitochondrial - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|52782699|sp|O94373.1|ATPF_SCHPO RecName: Full=ATP synthase subunit 4, mitochondrial; Flags: Precursor [NCBI NR]
  • gi|4007759|emb|CAA22340.1| F0-ATPase subunit [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113425|ref|NP_596633.1| F0-ATPase subunit [Schizosaccharomyces pombe] [NCBI NR]
  • F0-ATPase subunit [Sanger Pombe]
  • ATP synthase subunit 4, mitochondrial OS=Schizosaccharomyces pombe GN=atp4 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE MITOCHONDRIAL F0-ATPASE; MAMMALIAN SUBUNIT B: O94373; [pompepVF.fasta]
  • Putative mitochondrial F0-ATPase, mammalian subunit b (EC 3.6.1.34) [pompep4896]
  • |atp4||putative mitochondrial F0-ATPase [pompepnew.fasta]
  • ATP synthase subunit 4, mitochondrial precursor (EC 3.6.3.14) [4896.FASTAC]
  • |atp4||F0-ATPase|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • SPBC1604.07 [Schizosaccharomyces pombe]gi|19113425|ref|NP_596633.1| putative atp synthase subunit, mitochondrial precursor [Schizosaccharomyces pombe]gi|7492413|pir||T39507 probable ATP synthase subunit precursor, mitochondrial - fission yeast (Schizosa [nrdb_11152004_Chlamydomonas]
  • |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O94373) Putative mitochondrial F0-ATPase, mammalian subunit b (EC 3.6.1.34) [pompep4896_normal_reversed]
  • ATP synthase subunit 4, mitochondrial precursor [nr-271106-contam.fasta]
  • hypothetical protein SPBC1604.07 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC1604.07 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |atp4||F0-ATPase subunit |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • ATP synthase subunit 4, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atp4 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial proton-transporting ATP synthase, stator stalk [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    integral to membrane [ISSLink to PubMed article]
    Biological Process: mitochondrial ATP synthesis coupled proton transport [ISSLink to PubMed article]
    Molecular Function: proton-transporting ATPase activity, rotational mechanism [ISSLink to PubMed article]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKLFCLRS FPSVQRTAWQ RLVLPSTRKF SLTPTTFDKT PSGRIPPDQK AANIISSVPS  60
   61 TSLLTKSGVL TVTAAALATA ISKGIYVVND ESIVVASFLG LVGVFGTLGR KAYNEWSDKT 120
  121 IAKIGGIMQA ARNDHTSAIR ERIDQVASLQ EVESVTQALF HTSKETARME AEIFELEQRV 180
  181 ALAKEAKSVL DSWVHHEANV RAEQQERLVE DVLARVNSKV STQKFQQDAL NESLGEIEKV 240
  241 LASA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 60.30103 No description for 2clyA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  9.75824095339252 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  8.02996687028513 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  7.03421298777104 bayes_pls_golite062009
  • hydrogen-exporting ATPase activity, phosphorylative mechanism
    		•  6.33533983608004 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.43905785379115 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  3.40493178308083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.11087315592201 bayes_pls_golite062009
  • transporter activity
    		•  2.33132024466294 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
    		•  2.14184902122852 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  1.91129736413093 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.68240669590269 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.61544861060476 bayes_pls_golite062009
  • ATPase activity
    		•  1.60552572277149 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.5982352071671 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.5958855657846 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.51271412556287 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.35431931487507 bayes_pls_golite062009
  • binding
    		•  1.24770939036016 bayes_pls_golite062009
  • protein binding
    		•  1.15544550245769 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.907643434530535 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.90151467619641 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.873541340643087 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.870099443464063 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.870012300409237 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.869408183980935 bayes_pls_golite062009
  • catalytic activity
    		•  0.67288476528593 bayes_pls_golite062009
  • hydrolase activity
    		•  0.636687378087875 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.423824294580682 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle