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Protein Overview: suv3

General Information:
Name(s) found: suv3 / SPAC637.11 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • ATP-dependent RNA helicase Suv3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 647 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: mitochondrial RNA 3'-end processing [IMPLink to PubMed article]
    mitochondrion organization [RCALink to PubMed article]
    [NOT]RNA catabolic process [IMPLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    RNA binding [IEA]
    ATP-dependent RNA helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLETLIHGV TFCVPFFSKS ARIHTLSKDV FQQRKFPGNT LWAAALNRFT AYLFASKELS  60
   61 SKQAYLAQDF VNVCKDASVF QNVYYYELKK NILTDLGFSD LKNSDKSLAL SKSSSTFDLQ 120
  121 KIKKIHDCLL SEYRKYVRYQ ERIEETRPDL QKQLTDLKNP IEWYPGARKL RRHIIMHVGP 180
  181 TNSGKTHRAL ERLKTCKKGI FAGPLRLLAH EIYNRLQANG IACNLYTGEE IRNDYPFPQV 240
  241 VSCTVEMCNL STTFDVAVID EIQMMADPSR GYAWTQCLLG LQAKEIHLCG EESVVKLVRS 300
  301 IAKMTQDDFT VYRYERLNPL HVAEKSLNGK LSELKDGDCV VAFSRKNIFT LKSKIDQALG 360
  361 KKSAVIYGSL PPEVRNQQAS LFNSKSSDEN ILLASDAIGM GLNLGVKRIV FSDLKKFSGV 420
  421 STIDIPVPQI KQIAGRAGRH NPNGSKQSAG IVTTLYQKDF AKLNRAMNLP TKNLFNACIG 480
  481 AKDDLFFRYL SLFSDDIPQK LIFDRYFKLA KTTTPFVVSE GALSTFIIEY LDHIKGLTIK 540
  541 DKIKLLGCPV LKHSKYAPLF IREIGCVIAQ GKRLQIYDLK SVPLEILERG IPTTETELQQ 600
  601 LEQLHKLIVA YMWASIRYPA ILQNGAAEKT KAIAEAFLIK GISKLQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] deduced N/A No confident structure predictions are available.
    2 View Details [142..647] PSI-BLAST 35.0 Crystal structure of Escherichia coli transcription-repair coupling factor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.62320027057768 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.831762535895849 bayes_pls_golite062009
  • RNA helicase activity
    		•  0.73539642422624 bayes_pls_golite062009
  • RNA-dependent ATPase activity
    		•  0.70759024918936 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
    		•  0.68122080550778 bayes_pls_golite062009
  • hydrolase activity
    		•  0.533811513387322 bayes_pls_golite062009
  • DNA binding
    		•  0.526183203901145 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.390949264169589 bayes_pls_golite062009
  • helicase activity
    		•  0.32448546535964 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.22341412535263 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.222180491809685 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.219296317139543 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.194147556947887 bayes_pls_golite062009
  • nucleotide binding
    		•  0.114848452385726 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0915913646217636 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle