| Protein: | suv3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 647 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for suv3.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..3] | [612..1082] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MFLETLIHGV TFCVPFFSKS ARIHTLSKDV FQQRKFPGNT LWAAALNRFT AYLFASKELS 60
61 SKQAYLAQDF VNVCKDASVF QNVYYYELKK NILTDLGFSD LKNSDKSLAL SKSSSTFDLQ 120
121 KIKKIHDCLL SEYRKYVRYQ E
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-647] |
1 11 21 31 41 51
| | | | | |
1 RIEETRPDLQ KQLTDLKNPI EWYPGARKLR RHIIMHVGPT NSGKTHRALE RLKTCKKGIF 60
61 AGPLRLLAHE IYNRLQANGI ACNLYTGEEI RNDYPFPQVV SCTVEMCNLS TTFDVAVIDE 120
121 IQMMADPSRG YAWTQCLLGL QAKEIHLCGE ESVVKLVRSI AKMTQDDFTV YRYERLNPLH 180
181 VAEKSLNGKL SELKDGDCVV AFSRKNIFTL KSKIDQALGK KSAVIYGSLP PEVRNQQASL 240
241 FNSKSSDENI LLASDAIGMG LNLGVKRIVF SDLKKFSGVS TIDIPVPQIK QIAGRAGRHN 300
301 PNGSKQSAGI VTTLYQKDFA KLNRAMNLPT KNLFNACIGA KDDLFFRYLS LFSDDIPQKL 360
361 IFDRYFKLAK TTTPFVVSEG ALSTFIIEYL DHIKGLTIKD KIKLLGCPVL KHSKYAPLFI 420
421 REIGCVIAQG KRLQIYDLKS VPLEILERGI PTTETELQQL EQLHKLIVAY MWASIRYPAI 480
481 LQNGAAEKTK AIAEAFLIKG ISKLQK
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 2eyqA |
| Description: | Crystal structure of Escherichia coli transcription-repair coupling factor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.62320027057768 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| nucleic acid binding | 0.831762535895849 | bayes_pls_golite062009 |
| RNA helicase activity | 0.73539642422624 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.70759024918936 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.68122080550778 | bayes_pls_golite062009 |
| hydrolase activity | 0.533811513387322 | bayes_pls_golite062009 |
| DNA binding | 0.526183203901145 | bayes_pls_golite062009 |
| transcription regulator activity | 0.390949264169589 | bayes_pls_golite062009 |
| helicase activity | 0.32448546535964 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.22341412535263 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.222180491809685 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.219296317139543 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.194147556947887 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
