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Protein Overview: SPAC1687.17c

General Information:
Name(s) found: SPAC1687.17c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • Der1-like (degradation in the ER) family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 168 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ISSLink to PubMed article]
    integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: ER-associated protein catabolic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILPEFISQ TPPVTRYIVL GTLFTTLAVY WRAITTFLYV GPFGLELILY LSFLLRFMSM  60
   61 LERSSPPPQT QSFLKTVLIV WFSLLVTSYF SYMPFAASYF SFTMLYIWSW KHPLYRISIL 120
  121 GLFDVKAPYV PWVMVLLRWL RTGIFPLLDL ISALIGHVYF FVTDFSTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] PSI-BLAST 5.221849 No description for 2nr9A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.545407789079971 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle