YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC1687.17c
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILPEFISQ TPPVTRYIVL GTLFTTLAVY WRAITTFLYV GPFGLELILY LSFLLRFMSM  60
   61 LERSSPPPQT QSFLKTVLIV WFSLLVTSYF SYMPFAASYF SFTMLYIWSW KHPLYRISIL 120
  121 GLFDVKAPYV PWVMVLLRWL RTGIFPLLDL ISALIGHVYF FVTDFSTV

Type	Start	End	Confidence
Cytoplasmic	1	13	0.87
Transmembrane Helix	14	34	0.84
Non-Cytoplasmic	35	37	0.75
Transmembrane Helix	38	58	0.89
Cytoplasmic	59	76	0.80
Transmembrane Helix	77	96	0.89
Non-Cytoplasmic	97	113	0.74
Transmembrane Helix	114	133	0.68
Cytoplasmic	134	141	0.59
Transmembrane Helix	142	161	0.91
Non-Cytoplasmic	162	168	0.68