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Protein Overview: SPAC17D4.03c

General Information:
Name(s) found: SPAC17D4.03c [Sanger Pombe]
Description(s) found:
Found 15 descriptions.
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  • membrane transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 732 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Golgi membrane [IDALink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: vesicle-mediated transport [IMPLink to PubMed article]
    transmembrane transport [IEA]
    zinc ion transport [IMPLink to PubMed article]
    cellular zinc ion homeostasis [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]
    zinc ion transmembrane transporter activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVNSSAFER TNRFPSFPVL KDDQKTSSDS IAAAKKKDLL SLISSKSLLS SETLGWFSVI  60
   61 CAFSITGSGL EVNTMSIPFY LIFGIFAFVS FTTQYLGIYS FSFQPFQLLN VIIASLSMVF 120
  121 ITLGAFVLGT LDTTCLLLLA FKLFFIRNDP TPFNARSANL KNYIAFPICL FVINHILILL 180
  181 GYFQCSYSVF YASVFYILLG VFIRVFYLVN KEKFEKKELA FLFSSIVVAC LIQFNVLPLG 240
  241 TINLSVTRFT ILCFMQIFCI NWDGIARIQF YLGKFDISLI MALISAIINK TASQNSIKII 300
  301 SCLYQVGFCF FKIGSSITAN LKLPDNSRIY RLYNDFIVNG VLADKESRSI FYFFLLNVSY 360
  361 MFVQVIYGLW TNSLGLISDA IHMAFDCIAI LVGLVATTLA KMPLNYAYPF GFAKIEALSG 420
  421 FTNGIFLVLI SFSIVGEALY RLFHPPQMNT DQLLLVSFLG LVVNLVGILA FNHGHNHDHG 480
  481 SHHHHSHSNH SMCLPNTTND INIFEEFEEE KDNVEAQKMG YTNDDHVSQH EHTHENSQEH 540
  541 HHEHNHNHDH IHKYNEKCDH ESISLQNLDN DHHCHHHHEN HNMHGIFLHI IADTMGSVGV 600
  601 IVSTILIQWF SWTGFDPLAS LIIAALIFVS VLPLIKDSAK NLLSVTDPES EYLLKQCLSN 660
  661 ISLSNSVISL SNPKFWTNER GEVYGILHIQ VSIDGDLNVV RNEVFRKLSI AVPNLKHICI 720
  721 QSERPNNCWC GK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] deduced N/A No confident structure predictions are available.
    2 View Details [214..469] FFAS03 1.61 No description for 2qfiA was found.
    3 View Details [470..732] PSI-BLAST 39.30103 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  5.92891514013737 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.84249545493637 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.47016841740423 bayes_pls_golite062009
  • transporter activity
    		•  3.98293753989079 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.88313530012213 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.61385992680996 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.37050743362323 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.19121021485065 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.90853228829647 bayes_pls_golite062009
  • cation channel activity
    		•  1.44274272281585 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  1.28777469980862 bayes_pls_golite062009
  • binding
    		•  1.28505954375411 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.20401058605752 bayes_pls_golite062009
  • ion channel activity
    		•  0.914570427745709 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.878658430633935 bayes_pls_golite062009
  • channel activity
    		•  0.878658430633935 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.85991028753625 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.475232131680683 bayes_pls_golite062009
  • protein binding
    		•  0.318355149027855 bayes_pls_golite062009
  • cadmium ion transmembrane transporter activity
    		•  0.250934822515216 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.186398867523746 bayes_pls_golite062009
    3
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  6.3253503604398 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.22189384650962 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.82185991246167 bayes_pls_golite062009
  • transporter activity
    		•  4.27173462293249 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.18558383943492 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.94511592355578 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.43294134632841 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.32644140472297 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  1.98656970252979 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.95281540802467 bayes_pls_golite062009
  • cation channel activity
    		•  1.55011961058299 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.31663166812163 bayes_pls_golite062009
  • binding
    		•  1.27456652114636 bayes_pls_golite062009
  • ion channel activity
    		•  1.01093555209783 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.963824080292546 bayes_pls_golite062009
  • channel activity
    		•  0.963824080292546 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.948079854416241 bayes_pls_golite062009
  • cadmium ion transmembrane transporter activity
    		•  0.661906409169955 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.490905558612378 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.376948884172728 bayes_pls_golite062009
  • protein binding
    		•  0.311357063667067 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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