| Protein: | SPAC17D4.03c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 732 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC17D4.03c.
| Description | E-value | Query Range |
Subject Range |
|
|
249.0 | [0..313] | [723..20] |
|
|
243.0 | [0..336] | [725..41] |
|
|
243.0 | [0..346] | [725..54] |
|
|
241.0 | [0..338] | [727..322] |
|
|
241.0 | [0..333] | [725..38] |
|
|
236.0 | [0..334] | [723..74] |
|
|
229.0 | [0..340] | [723..44] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MNVNSSAFER TNRFPSFPVL KDDQKTSSDS IAAAKKKDLL SLISSKSLLS SETLGWFSVI 60
61 CAFSITGSGL EVNTMSIPFY LIFGIFAFVS FTTQYLGIYS FSFQPFQLLN VIIASLSMVF 120
121 ITLGAFVLGT LDTTCLLLLA FKLFFIRNDP TPFNARSANL KNYIAFPICL FVINHILILL 180
181 GYFQCSYSVF YASVFYILLG VFIRVFYLVN KEK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [214-469] |
1 11 21 31 41 51
| | | | | |
1 FEKKELAFLF SSIVVACLIQ FNVLPLGTIN LSVTRFTILC FMQIFCINWD GIARIQFYLG 60
61 KFDISLIMAL ISAIINKTAS QNSIKIISCL YQVGFCFFKI GSSITANLKL PDNSRIYRLY 120
121 NDFIVNGVLA DKESRSIFYF FLLNVSYMFV QVIYGLWTNS LGLISDAIHM AFDCIAILVG 180
181 LVATTLAKMP LNYAYPFGFA KIEALSGFTN GIFLVLISFS IVGEALYRLF HPPQMNTDQL 240
241 LLVSFLGLVV NLVGIL
|
| Detection Method: | |
| Confidence: | 1.61 |
| Match: | 2qfiA |
| Description: | No description for 2qfiA was found. |
| Term | Confidence | Notes |
| cation transmembrane transporter activity | 5.92891514013737 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.84249545493637 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.47016841740423 | bayes_pls_golite062009 |
| transporter activity | 3.98293753989079 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.88313530012213 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.61385992680996 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.37050743362323 | bayes_pls_golite062009 |
| transition metal ion transmembrane transporter activity | 2.19121021485065 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 1.90853228829647 | bayes_pls_golite062009 |
| cation channel activity | 1.44274272281585 | bayes_pls_golite062009 |
| efflux transmembrane transporter activity | 1.28777469980862 | bayes_pls_golite062009 |
| binding | 1.28505954375411 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 1.20401058605752 | bayes_pls_golite062009 |
| ion channel activity | 0.914570427745709 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.878658430633935 | bayes_pls_golite062009 |
| channel activity | 0.878658430633935 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.85991028753625 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.475232131680683 | bayes_pls_golite062009 |
| protein binding | 0.318355149027855 | bayes_pls_golite062009 |
| cadmium ion transmembrane transporter activity | 0.250934822515216 | bayes_pls_golite062009 |
| iron ion transmembrane transporter activity | 0.186398867523746 | bayes_pls_golite062009 |
|
Region A: Residues: [470-732] |
1 11 21 31 41 51
| | | | | |
1 AFNHGHNHDH GSHHHHSHSN HSMCLPNTTN DINIFEEFEE EKDNVEAQKM GYTNDDHVSQ 60
61 HEHTHENSQE HHHEHNHNHD HIHKYNEKCD HESISLQNLD NDHHCHHHHE NHNMHGIFLH 120
121 IIADTMGSVG VIVSTILIQW FSWTGFDPLA SLIIAALIFV SVLPLIKDSA KNLLSVTDPE 180
181 SEYLLKQCLS NISLSNSVIS LSNPKFWTNE RGEVYGILHI QVSIDGDLNV VRNEVFRKLS 240
241 IAVPNLKHIC IQSERPNNCW CGK
|
| Detection Method: | |
| Confidence: | 39.30103 |
| Match: | 2qfiA |
| Description: | No description for 2qfiA was found. |
| Term | Confidence | Notes |
| cation transmembrane transporter activity | 6.3253503604398 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 6.22189384650962 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.82185991246167 | bayes_pls_golite062009 |
| transporter activity | 4.27173462293249 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.18558383943492 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.94511592355578 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.43294134632841 | bayes_pls_golite062009 |
| transition metal ion transmembrane transporter activity | 2.32644140472297 | bayes_pls_golite062009 |
| efflux transmembrane transporter activity | 1.98656970252979 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 1.95281540802467 | bayes_pls_golite062009 |
| cation channel activity | 1.55011961058299 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 1.31663166812163 | bayes_pls_golite062009 |
| binding | 1.27456652114636 | bayes_pls_golite062009 |
| ion channel activity | 1.01093555209783 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.963824080292546 | bayes_pls_golite062009 |
| channel activity | 0.963824080292546 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.948079854416241 | bayes_pls_golite062009 |
| cadmium ion transmembrane transporter activity | 0.661906409169955 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.490905558612378 | bayes_pls_golite062009 |
| iron ion transmembrane transporter activity | 0.376948884172728 | bayes_pls_golite062009 |
| protein binding | 0.311357063667067 | bayes_pls_golite062009 |
