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Protein Overview: SPAC9G1.05

General Information:
Name(s) found: SPAC9G1.05 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • actin cortical patch component Aip1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 595 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    actin cortical patch [ISSLink to PubMed article]
    Biological Process: actin filament depolymerization [ISSLink to PubMed article]
    response to osmotic stress [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQLKSTWA PVPSTKPSQP CKIGTDFKGE RIVYPANKAI IIREIEKQEN CFQYNEHTAP  60
   61 TTVARFSPSG YYVASGDNQG NVRIWDCAGE DKILKNQVTA ISGRITDLDW DGDSQRIIAV 120
  121 GEGKERYGHA FTADSGNSVG EIFGHSSVVN AVSLRKSRPF RAATASDDNS INFFHGTPYR 180
  181 FNRSLRVHSK FVYDVRYSPN DERFASAGAD GKVYVFDGKT GDQVYEIDAH KGSIFSISWS 240
  241 PDSSQFVTSS AGYSCKIWDA NTGSLIREWL SSDKKQLVGT VWPTKDLIIV VNSKGNLTYL 300
  301 NPSDCKVIDT IYGHQRSITA ATLSPDATHF YTASYDGTVL SWDIGKQKAF PLVGESHTNQ 360
  361 VMQMIMADDH VITIGMDDTL RVIDIKQGCF AKDNVFPTGY QPIGVCSVED CLILVTVSDI 420
  421 QVLRSLTGVS TAKTIYQPSA VASHPLKSEF CVGGEDCCVY IHTLEKGELC EVAQCKDSTA 480
  481 PITCLAYSPD GKYLACGDAS GKVVLYDANS REVITSRWAF HTGRILGMSW NAKSTHLATA 540
  541 SLDTNIHIYS VERPMKYIAM KNAHSLGATQ VEWVSENELL STGSDAAIKV WSVTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..595] PSI-BLAST 60.0 Actin interacting protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
    		• 6.67009948605948 bayes_pls_golite062009
  • actin binding
    		•  3.86142918698875 bayes_pls_golite062009
  • RNA binding
    		•  3.77273677738815 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  3.1056443224755 bayes_pls_golite062009
  • binding
    		•  2.42570478946173 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.3610959773142 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.30918780727915 bayes_pls_golite062009
  • transcription repressor activity
    		•  2.29049708962212 bayes_pls_golite062009
  • snoRNA binding
    		•  2.27164613239345 bayes_pls_golite062009
  • actin filament binding
    		•  2.0735069176589 bayes_pls_golite062009
  • DNA binding
    		•  1.71685536470455 bayes_pls_golite062009
  • transcription corepressor activity
    		•  1.41752877005447 bayes_pls_golite062009
  • structural molecule activity
    		•  1.31060431370834 bayes_pls_golite062009
  • myosin heavy chain kinase activity
    		•  1.24520283111044 bayes_pls_golite062009
  • protein binding
    		•  1.21879977456466 bayes_pls_golite062009
  • transporter activity
    		•  1.21549336905926 bayes_pls_golite062009
  • receptor activity
    		•  1.12819778129653 bayes_pls_golite062009
  • transcription factor activity
    		•  1.08768505897883 bayes_pls_golite062009
  • mRNA binding
    		•  1.05053985350578 bayes_pls_golite062009
  • myosin binding
    		•  0.989691178611801 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.974380908248463 bayes_pls_golite062009
  • signal transducer activity
    		•  0.974380908248463 bayes_pls_golite062009
  • tubulin binding
    		•  0.968047176592527 bayes_pls_golite062009
  • microtubule binding
    		•  0.834073483714259 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.734793983890004 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.676924760416604 bayes_pls_golite062009
  • transcription factor binding
    		•  0.489473003915035 bayes_pls_golite062009
  • dynein binding
    		•  0.41765917405931 bayes_pls_golite062009
  • receptor binding
    		•  0.316169754698691 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.30761651528651 bayes_pls_golite062009
  • chromatin binding
    		•  0.151977098745772 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.121872424136545 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.118975415284669 bayes_pls_golite062009
  • myosin II binding
    		•  0.0145748031956598 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle