| Protein: | SPAC9G1.05 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 595 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC9G1.05.
| Description | E-value | Query Range |
Subject Range |
|
|
499.0 | [0..12] | [595..1167] |
|
|
482.0 | [0..6] | [595..1033] |
|
|
464.0 | [0..17] | [591..158] |
|
|
460.0 | [0..12] | [593..901] |
|
|
458.0 | [0..18] | [593..566] |
|
|
454.0 | [0..11] | [592..642] |
|
Region A: Residues: [1-595] |
1 11 21 31 41 51
| | | | | |
1 MSSQLKSTWA PVPSTKPSQP CKIGTDFKGE RIVYPANKAI IIREIEKQEN CFQYNEHTAP 60
61 TTVARFSPSG YYVASGDNQG NVRIWDCAGE DKILKNQVTA ISGRITDLDW DGDSQRIIAV 120
121 GEGKERYGHA FTADSGNSVG EIFGHSSVVN AVSLRKSRPF RAATASDDNS INFFHGTPYR 180
181 FNRSLRVHSK FVYDVRYSPN DERFASAGAD GKVYVFDGKT GDQVYEIDAH KGSIFSISWS 240
241 PDSSQFVTSS AGYSCKIWDA NTGSLIREWL SSDKKQLVGT VWPTKDLIIV VNSKGNLTYL 300
301 NPSDCKVIDT IYGHQRSITA ATLSPDATHF YTASYDGTVL SWDIGKQKAF PLVGESHTNQ 360
361 VMQMIMADDH VITIGMDDTL RVIDIKQGCF AKDNVFPTGY QPIGVCSVED CLILVTVSDI 420
421 QVLRSLTGVS TAKTIYQPSA VASHPLKSEF CVGGEDCCVY IHTLEKGELC EVAQCKDSTA 480
481 PITCLAYSPD GKYLACGDAS GKVVLYDANS REVITSRWAF HTGRILGMSW NAKSTHLATA 540
541 SLDTNIHIYS VERPMKYIAM KNAHSLGATQ VEWVSENELL STGSDAAIKV WSVTF
|
| Detection Method: |  |
| Confidence: | 60.0 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 6.67009948605948 | bayes_pls_golite062009 | |
| actin binding | 3.86142918698875 | bayes_pls_golite062009 |
| RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| transcription repressor activity | 2.29049708962212 | bayes_pls_golite062009 |
| snoRNA binding | 2.27164613239345 | bayes_pls_golite062009 |
| actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.41752877005447 | bayes_pls_golite062009 |
| structural molecule activity | 1.31060431370834 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 1.24520283111044 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
| myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| tubulin binding | 0.968047176592527 | bayes_pls_golite062009 |
| microtubule binding | 0.834073483714259 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.676924760416604 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| dynein binding | 0.41765917405931 | bayes_pls_golite062009 |
| receptor binding | 0.316169754698691 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| chromatin binding | 0.151977098745772 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.121872424136545 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| myosin II binding | 0.0145748031956598 | bayes_pls_golite062009 |
