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Protein Overview: SPAC12B10.05

General Information:
Name(s) found: SPAC12B10.05 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • metallopeptidase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 486 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: mitochondrial protein processing [ISS]
    protein maturation by peptide bond cleavage [ISS]
    Molecular Function: metalloaminopeptidase activity [ISSLink to PubMed article]
    manganese ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGYIRTLFI RNRFSNYRLR SQIIKYKYSN VSYLNKSALR CGQATDSTHP HILQPGELTP  60
   61 RISAQEYKTR RDRVASLLED NDFMIVTSAP VRHMCGAAFY EYHQDPNFYY LTGCLEPNAV 120
  121 LLMFKNGASG SYDCSLYLPS KNPYIEKWEG LRTGSTLGKK LFQIENVYDS SLASSVINAL 180
  181 GKKSNRIFYN YQTGYLSKMP AASAPEFIQD TLTKLFRTST QRSVDELLHP LRSIKSTAEL 240
  241 ECMKEAANIS SNVYREIMRK RFEKEAEMSA EFNYRFCIGG CDRSAYVPVV AGGKNGLTIH 300
  301 YTINNDIFRP DEMVLVDAGG EFGGYVTDIS RTWPINGKFS TVQRDLYQAV LNVQKKCIKY 360
  361 CCTSNGWSLA DIHFESVKLM HEELKQVGIH GTKREITDIL YPHSIGHEIG LEIHDCSTNN 420
  421 GYQPLRKNQV ITIEPGLYVP EEDGWPQWAQ GIAIRIEDSV IVGDDKPFVL TSAAPKEIEE 480
  481 IEALKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..486] PSI-BLAST 94.221849 AMINOPEPTIDASE P FROM E. COLI LOW PH FORM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  2.60615909541559 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.18503136472662 bayes_pls_golite062009
  • metallopeptidase activity
    		•  1.75829852010848 bayes_pls_golite062009
  • hydrolase activity
    		•  1.43646476372001 bayes_pls_golite062009
  • aminopeptidase activity
    		•  0.89399203910285 bayes_pls_golite062009
  • binding
    		•  0.762408229471586 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.762255574851485 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.352607952828331 bayes_pls_golite062009
  • catalytic activity
    		•  0.148551873544128 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0346092896934742 bayes_pls_golite062009
  • DNA binding
    		•  0.0315289262145955 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle