Protein Overview: SPAC1F12.05

General Information:
Name(s) found:	SPAC1F12.05 [Sanger Pombe]
Description(s) found: SHOW ONLY BEST	gi\|2130238\|pir\|\|S67448 hypothetical protein YOR322c homolog SPAC1F12.05 - fission yeast (Schizosaccharomyces pombe) [NCBI NR] gi\|19115243\|ref\|NP_594331.1\| conserved fungal protein [Schizosaccharomyces pombe] [NCBI NR] gi\|1723510\|sp\|Q10347.1\|YDA5_SCHPO RecName: Full=Uncharacterized protein C1F12.05 [NCBI NR] gi\|1217979\|emb\|CAA93809.1\| endocytosis regulator (predicted) [Schizosaccharomyces pombe] [NCBI NR] conserved fungal protein [Sanger Pombe] Uncharacterized protein C1F12.05 OS=Schizosaccharomyces pombe GN=SPAC1F12.05 PE=2 SV=1 [Swiss-Prot] HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YOR322C: Q10347; [pompepVF.fasta] Hypothetical protein C1F12.05 in chromosome I [pompep4896] \|\|\|conserved fungal protein [pompepnew.fasta] \|\|\|conserved fungal protein\|Schizosaccharomyces pombe\|chr 1\|\|\|Manual [pombe041504.fasta] hypothetical protein [Schizosaccharomyces pombe]gi\|1217979\|emb\|CAA93809.1\| SPAC1F12.05 [Schizosaccharomyces pombe]gi\|1723510\|sp\|Q10347\|YDA5_SCHPO Hypothetical protein C1F12.05 in chromosome Igi\|2130238\|pir\|\|S67448 hypothetical protein YOR322c homolog S [nrdb_11152004_Chlamydomonas] (Q10347) Hypothetical protein C1F12.05 in chromosome I [pompep4896_normal_reversed] \|\|\|endocytosis regulator \|Schizosaccharomyces pombe\|chr 1\|\|\|Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta] hypothetical protein SPAC1F12.05 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta] SPAC1F12.05 [Schizosaccharomyces pombe] [nr-271106-contam.fasta] Uncharacterized protein C1F12.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F12.05 PE=4 SV=1 [uniprot_sprot.fasta.20160308]
Organism:	Schizosaccharomyces pombe
Length:	377 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytosol [IDA] clathrin-coated vesicle [ISS]
Biological Process:	ubiquitin-dependent endocytosis [ISS]
Molecular Function:	ubiquitin protein ligase binding [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLVRRFQH ASTEEQPFEL NIQMESPPLV MYGNPDVSSG ALASGLAKLT VFPADLKCES  60
   61 IVMEFVRIIS TKRPLRDSCP DCKAQVEAFE KWEFSKEPTV YTHGTHTWPF TFIIPGHFPQ 120
  121 TTNSPFINVT YILKTRVKIP SQPDFVFEYP LNLKRSIVTN ADKIAQRLFP PTSLIALLEL 180
  181 PPVIHPLSCV PVEFQLTGVK PENSKVGWRL TKISWRIEEQ IKAQINGCST HTGTKKPYIF 240
  241 KETRLLGNNE HKSGWKEDGD RIIFEIPIST SLLSKPICDV SFDGQFSLYI AHQLILETIV 300
  301 VEVMNSHPIN SNARILRMKV NLPLTERGGL GVSWDEECPP MFNSVGPSPP AYEQVARSSP 360
  361 TDIPLPPPSC PTNVQRD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
clathrin binding	2.75916108281518	bayes_pls_golite062009
binding	2.5075656948209	bayes_pls_golite062009
protein binding	1.71025015568774	bayes_pls_golite062009
substrate-specific transporter activity	0.929966017205863	bayes_pls_golite062009
potassium channel activity	0.871728492941793	bayes_pls_golite062009
voltage-gated cation channel activity	0.848303301157398	bayes_pls_golite062009
voltage-gated ion channel activity	0.829939555243379	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.829140804686535	bayes_pls_golite062009
voltage-gated channel activity	0.820413268771765	bayes_pls_golite062009
channel activity	0.796075411518814	bayes_pls_golite062009
passive transmembrane transporter activity	0.796075411518814	bayes_pls_golite062009
substrate-specific channel activity	0.790863065462458	bayes_pls_golite062009
voltage-gated potassium channel activity	0.787347074261486	bayes_pls_golite062009
cation channel activity	0.770955130885998	bayes_pls_golite062009
ion transmembrane transporter activity	0.760234877475175	bayes_pls_golite062009
ion channel activity	0.743051345681968	bayes_pls_golite062009
metal ion transmembrane transporter activity	0.735623329949285	bayes_pls_golite062009
cation transmembrane transporter activity	0.698762820554681	bayes_pls_golite062009
gated channel activity	0.62499749903999	bayes_pls_golite062009
inward rectifier potassium channel activity	0.43450134854604	bayes_pls_golite062009
ligand-gated channel activity	0.302082279531376	bayes_pls_golite062009
ligand-gated ion channel activity	0.302082279531376	bayes_pls_golite062009
cytoskeletal protein binding	0.24498703916422	bayes_pls_golite062009
actin binding	0.15943777627145	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..100]	deduced	N/A	No confident structure predictions are available.
2	View Details	[101..377]	PSI-BLAST	6.69897	Arrestin

Protein Overview: SPAC1F12.05

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: