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Protein Overview: SPAC3H1.02c

General Information:
Name(s) found: SPAC3H1.02c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • metallopeptidase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1036 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: proteolysis [ISSLink to PubMed article]
    peptide mating pheromone maturation involved in pheromone-induced unidirectional conjugation [IC]
    Molecular Function: zinc ion binding [IEA]
    metalloendopeptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSDDTSFRQ ISSERILNYT VNKWINDATG FSVASVKTPT SRLQGSFVVA TEAHDNLGCP  60
   61 HTLEHLCFMG SKKYPMNGIL TKFAGRACGD INACTDVDYT SYELSAAEED GFLRLLPVFA 120
  121 DHILSPILSD EAFCTEVYHI NGMGEESGVV YSEMQNTQSS ETDVMFDCMR TSQYPVTSGY 180
  181 YYETGGHPSE LRKLSIEKIR EYHKEMYVPS NICLIVTGCI NESRLLSCAS GIVKEILANG 240
  241 IITPPTWTRP WCSTNVDYTI PEPILKTVKF SSEDEYTGSV SLAWNGPSAL DAYTVFAIET 300
  301 LCEFLSESAV SPFGQTFVEI EDPFCSFVYF YVSLRVPCSI QLFFDSVPLE KINGLEQRAL 360
  361 RLLAETKQID MNRMKDYLKT RRDQYLTNLE AFPSSLFMKI LTLDHVYGSR EGKDLPNLLK 420
  421 MLEYNRLLEE WEEKDWLKLL KKWFVENNSV TVIALPSFEM AENIKKENAE QLNKRRCLLG 480
  481 ASGLEKLAEK LKKSKEKNEQ KLSVNLISSF RISDPESIRF YSSTTARTRS AGQPFDNEVQ 540
  541 TYIDTDVSSE NPFIQFDHID SSFVQLATYI DTSMIPSSLK PYLSVFAKYI EAAPALLSGT 600
  601 IPTPYHEVVK QLERDTVSLN VSLSFDTSSC GYAYYETKRE LLSIEIKVTR ENYEKGVYWI 660
  661 RNLLAKTVWD RERMLSVINQ QLADIPFQKR DAEFILPSYF DIRLYNDCSL KYSLNTLSQE 720
  721 KILRELRDKL QNDHSSIFDA FQKMRNYMLQ HQAIRIHVIG DILKLPQPIS TWNKLLDSEC 780
  781 HRNPNMEFLS TFSKNYLKPQ EFGSSSSLTV IPMPSNESSD LVFSIPGITS WLDPSLPVIV 840
  841 LIANYLGLMD GPFWNTIRGS GLAYGFNMSI DVDGGVLYYC INTSPDVYKA WASSRDLVKS 900
  901 LISGEVQVSS FDLESAKCVS YSIVSELENN AIYSSKNSFT LLSIKGLNKD EDHKFLEKVK 960
  961 QVTLQQFLEG LKIYCLPFFS SSNNLAVITS SLAKIEQTVE QFTEEGFNVN VESLHEIQGI1020
 1021 ESESEDDLSV GGNDDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1036] PSI-BLAST 133.0 No description for 2fgeA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  3.69244584360647 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.08483676722061 bayes_pls_golite062009
  • endopeptidase activity
    		•  2.95066280153013 bayes_pls_golite062009
  • hydrolase activity
    		•  2.42559068821325 bayes_pls_golite062009
  • metallopeptidase activity
    		•  2.13305051098292 bayes_pls_golite062009
  • metalloendopeptidase activity
    		•  1.79244321225531 bayes_pls_golite062009
  • binding
    		•  1.51460850438647 bayes_pls_golite062009
  • catalytic activity
    		•  1.30647052031202 bayes_pls_golite062009
  • structural molecule activity
    		•  0.389336364351523 bayes_pls_golite062009
  • protein binding
    		•  0.236143103582996 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle