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Protein Overview: spo6

General Information:
Name(s) found: spo6 / SPBC1778.04 [Sanger Pombe]
Description(s) found:
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  • gi|5689014|dbj|BAA82783.1| Spo6 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|4539243|emb|CAB39799.1| Spo4-Spo6 kinase complex regulatory subunit Spo6 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|26400045|sp|Q9Y7J1.1|SPO6_SCHPO RecName: Full=Sporulation-specific protein 6 [NCBI NR]
  • gi|19113079|ref|NP_596287.1| Spo4-Spo6 kinase complex regulatory subunit Spo6 [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T43504 spo6 protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • Spo4-Spo6 kinase complex regulatory subunit Spo6 [Sanger Pombe]
  • Sporulation-specific protein 6 OS=Schizosaccharomyces pombe GN=spo6 PE=2 SV=1 [Swiss-Prot]
  • REQUIRED FOR MEIOSIS II; REQUIRED FOR SPORULATION; SPO4P REGULATORY SUBUNIT: Q9Y7J1; [pompepVF.fasta]
  • REQUIRED FOR MEIOSIS II; REQUIRED FOR SPORULATION: Q9Y7J1; [pompepV13]
  • Sporulation-specific protein 6 [pompep4896]
  • |spo6||required for meiosis II [pompepnew.fasta]
  • |spo6||Spo4p regulatory subunit|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • Spo6p; similarity to S. pombe rad35/dfp1 [Schizosaccharomyces pombe]gi|4539243|emb|CAB39799.1| SPBC1778.04 [Schizosaccharomyces pombe]gi|26400045|sp|Q9Y7J1|SPO6_SCHPO Sporulation-specific protein 6gi|11359314|pir||T43504 spo6 protein - fission yeast (S [nrdb_11152004_Chlamydomonas]
  • (Q9Y7J1) Sporulation-specific protein 6 [pompep4896_normal_reversed]
  • |spo6||Spo4-Spo6 kinase complex regulatory subunit Spo6|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • Spo6 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • SPBC1778.04 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC1778.04 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Sporulation-specific protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spo6 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nucleoplasm [ISSLink to PubMed article]
    Biological Process: ascospore formation [IMPLink to PubMed article]
    signal transduction [IC]
    regulation of catalytic activity [ICLink to PubMed article]
    meiosis II [IMPLink to PubMed article]
    protein amino acid phosphorylation [ISSLink to PubMed article]
    regulation of phosphorylation [ICLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    protein kinase regulator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFYSVKSQP FVRSPLVDQN PSIQNINEEV KRDIQNPLSY KTETSDKELC QTAACATSCS  60
   61 DWYPQQQTHM PHQNAFDSAK ATAKMALPPT AFSNYCVKPS LTRNKDIPRT SIRVSKLRYW 120
  121 QRDYRLAFPN FIFYFDNVDE EIKRRVTQKI NNLGAKVATL FTFEVTHFIT TRTTDPEMCQ 180
  181 PNDVLYLSKT ANMKIWLLDK LLNRILFTLL NSDSLVNTSA SCLQSLLDGE KVYGTSDKDF 240
  241 YVPSKNVEYF REYFLCIRDL SQYYKPIAVR EWEKTLDSGE ILWPSLAITA QGRCPFNTGR 300
  301 RRELKITKHN HPAHEIRKQL LSCTNQTNQN NVVKNSASVL VRQIMGDYNI TESAVDGAKQ 360
  361 MPTEFPKPEN LLPVEKRAAM SPLNLLEPRL INKQNTLANQ SPRQPPNAFD ADPLAHKKVK 420
  421 IETKSGYCEN CCERYKDLER HLGGKHHRRF AEKDENFQGL DDLFLLIRRP IRTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..235] FFAS03 1.53 The third BRCA1 C-terminus (BRCT) domain of Similar to S.pombe rad4+/cut5+ product
    3 View Details [236..362] deduced N/A No confident structure predictions are available.
    4 View Details [363..474] MSA 6.028996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.35986940498978 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.23726848385925 bayes_pls_golite062009
  • DNA binding
    		•  1.21803358548345 bayes_pls_golite062009
  • protein binding
    		•  1.17425096415314 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.948550635369826 bayes_pls_golite062009
  • damaged DNA binding
    		•  0.573570505312825 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.253994205417832 bayes_pls_golite062009
  • catalytic activity
    		•  0.201193336576136 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle