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Protein Overview: res1

General Information:
Name(s) found: res1 / SPBC725.16 [Sanger Pombe]
Description(s) found:
Found 23 descriptions.
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  • MBF transcription factor complex subunit Res1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 637 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    MBF transcription complex [TASLink to PubMed article]
    Biological Process: regulation of transcription, meiotic [TASLink to PubMed article]
    G1/S transition of mitotic cell cycle [TASLink to PubMed article]
    positive regulation of transcription, mitotic [IDALink to PubMed article]
    traversing start control point of mitotic cell cycle [IMPLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: transcription factor activity [TASLink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNDQIHKIT YSGVEVFEYT INGFPLMKRC HDNWLNATQI LKIAELDKPR RTRILEKFAQ  60
   61 KGLHEKIQGG CGKYQGTWVP SERAVELAHE YNVFDLIQPL IEYSGSAFMP MSTFTPQSNR 120
  121 KPTEAYRRNS PVKKSFSRPS HSLLYPYTSS NNMTSTSRMS GIHDALSLQS DFTRSPDMPS 180
  181 DSFTGSLHDI KASPFSSNNY AQSLLDYFLL PNTTQPPDFV YDRPSDWDVN AGIDEDGHTA 240
  241 LHWAAAMGNL EMMHALLQAG ANVVAVNYLQ QTSLMRCVMF TMNYDLQTFE VVSELLQSAI 300
  301 CMNDSFGQTV FHHIALLASS KSKMEAARYY MDILLQNLTA TQSVDVAAQI INLQDDHGDT 360
  361 ALLICARNGA KKCARLLLSF YASSSIPNNQ GQYPTDFLSS KDMSFPENDD SPLNSKIEDN 420
  421 LIDNLKYPQS LDDHLSSKKP ISYFSNKLTH QTLPNVFTQL SELSKCHEAS LAEKQLTYNL 480
  481 AMEALEQTVR ETETCQRLWN ERTNNDENYL VNQREDLIHQ CKKFLHTLKT ARYYLETVQL 540
  541 HQLKKYVTYF SQIWSTDELA DISETKNLVG HDTKTNRSSL SSKHEVDLFT AENEAAREKL 600
  601 VEQLCSLQAQ RKQKINEILN LLSMGMYNTI NTDQSGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..439] PSI-BLAST 73.0 Ankyrin-R
    2 View Details [440..637] FFAS03 0.979 Fibrinogen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.69918165732603 bayes_pls_golite062009
  • binding
    		•  2.60916417202222 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.37103377984038 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.8957142857582 bayes_pls_golite062009
  • DNA binding
    		•  1.78305438715057 bayes_pls_golite062009
  • transcription activator activity
    		•  1.6418915400902 bayes_pls_golite062009
  • transcription factor activity
    		•  1.2667825651547 bayes_pls_golite062009
  • transcription factor binding
    		•  1.06366405671195 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.949906091645366 bayes_pls_golite062009
  • cyclin-dependent protein kinase regulator activity
    		•  0.68541709976608 bayes_pls_golite062009
  • protein kinase regulator activity
    		•  0.576422771673579 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.56201598804914 bayes_pls_golite062009
  • kinase regulator activity
    		•  0.4228431685549 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle