| Protein: | res1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 637 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for res1.
| Description | E-value | Query Range |
Subject Range |
|
|
403.0 | [0..3] | [558..76] |
|
|
400.0 | [0..3] | [558..76] |
|
|
398.0 | [0..3] | [631..66] |
|
Region A: Residues: [1-439] |
1 11 21 31 41 51
| | | | | |
1 MYNDQIHKIT YSGVEVFEYT INGFPLMKRC HDNWLNATQI LKIAELDKPR RTRILEKFAQ 60
61 KGLHEKIQGG CGKYQGTWVP SERAVELAHE YNVFDLIQPL IEYSGSAFMP MSTFTPQSNR 120
121 KPTEAYRRNS PVKKSFSRPS HSLLYPYTSS NNMTSTSRMS GIHDALSLQS DFTRSPDMPS 180
181 DSFTGSLHDI KASPFSSNNY AQSLLDYFLL PNTTQPPDFV YDRPSDWDVN AGIDEDGHTA 240
241 LHWAAAMGNL EMMHALLQAG ANVVAVNYLQ QTSLMRCVMF TMNYDLQTFE VVSELLQSAI 300
301 CMNDSFGQTV FHHIALLASS KSKMEAARYY MDILLQNLTA TQSVDVAAQI INLQDDHGDT 360
361 ALLICARNGA KKCARLLLSF YASSSIPNNQ GQYPTDFLSS KDMSFPENDD SPLNSKIEDN 420
421 LIDNLKYPQS LDDHLSSKK
|
| Detection Method: |  |
| Confidence: | 73.0 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.69918165732603 | bayes_pls_golite062009 |
| binding | 2.60916417202222 | bayes_pls_golite062009 |
| transcription regulator activity | 2.37103377984038 | bayes_pls_golite062009 |
| nucleic acid binding | 1.8957142857582 | bayes_pls_golite062009 |
| DNA binding | 1.78305438715057 | bayes_pls_golite062009 |
| transcription activator activity | 1.6418915400902 | bayes_pls_golite062009 |
| transcription factor activity | 1.2667825651547 | bayes_pls_golite062009 |
| transcription factor binding | 1.06366405671195 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.949906091645366 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase regulator activity | 0.68541709976608 | bayes_pls_golite062009 |
| protein kinase regulator activity | 0.576422771673579 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.56201598804914 | bayes_pls_golite062009 |
| kinase regulator activity | 0.4228431685549 | bayes_pls_golite062009 |
|
Region A: Residues: [440-637] |
1 11 21 31 41 51
| | | | | |
1 PISYFSNKLT HQTLPNVFTQ LSELSKCHEA SLAEKQLTYN LAMEALEQTV RETETCQRLW 60
61 NERTNNDENY LVNQREDLIH QCKKFLHTLK TARYYLETVQ LHQLKKYVTY FSQIWSTDEL 120
121 ADISETKNLV GHDTKTNRSS LSSKHEVDLF TAENEAAREK LVEQLCSLQA QRKQKINEIL 180
181 NLLSMGMYNT INTDQSGS
|
| Detection Method: | |
| Confidence: | 0.979 |
| Match: | 1deqB |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
