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Protein Overview: rec14

General Information:
Name(s) found: rec14 / SPBC32F12.02 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • recombination protein Rec14 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 302 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Ski complex [ISS]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: reciprocal meiotic recombination [IMPLink to PubMed article]
    mRNA catabolic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKEYLVSHI EENAHQADIY SLNVVAGNLW SASGDSKIKK WSIGDAEHSL VEEIDTPHKL  60
   61 GVHHLATSLD ENVVVSCGFG QDVYVWNPET NEFRDLGNNA QHPSECWSSC ISPDGQTIAF 120
  121 TSVDGRIAVW DNPSDCKISE LDTKGKFGLC IDYSPNGRFI VSGHQTGQLF LISTETGRLF 180
  181 HVLSGHTSPV RSVAFSPGST LLAAAGDSKM ITIYDVLSGD QVGQLRGHAA WIFAVAFNPV 240
  241 GDLLLSADVE GKIKIWDIDT MECISTQSET DGAIWAVAWY KNGFIVAGAD KSIRWYRAAA 300
  301 TE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302] PSI-BLAST 71.30103 PAF-AH Holoenzyme: Lis1/Alfa2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
    		• 3.12192428374026 bayes_pls_golite062009
  • binding
    		•  2.42570478946173 bayes_pls_golite062009
  • protein binding
    		•  2.26925404328312 bayes_pls_golite062009
  • RNA binding
    		•  2.1927334052131 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.10036013463576 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.95667720244696 bayes_pls_golite062009
  • actin binding
    		•  1.95169936993576 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.90457914882449 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  1.7032681012791 bayes_pls_golite062009
  • structural molecule activity
    		•  1.47448876401574 bayes_pls_golite062009
  • DNA binding
    		•  1.38475369554616 bayes_pls_golite062009
  • transporter activity
    		•  0.807925044108643 bayes_pls_golite062009
  • transcription factor activity
    		•  0.804334981068351 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.625780732991652 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.560226369775279 bayes_pls_golite062009
  • signal transducer activity
    		•  0.526268909626683 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.526268909626683 bayes_pls_golite062009
  • DNA polymerase activity
    		•  0.48827205019881 bayes_pls_golite062009
  • transcription factor binding
    		•  0.412844855996155 bayes_pls_golite062009
  • snoRNA binding
    		•  0.347797037104681 bayes_pls_golite062009
  • protein transporter activity
    		•  0.304660759584581 bayes_pls_golite062009
  • actin filament binding
    		•  0.263920116138248 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  0.2578464839973 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.19391619547146 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.159676326911734 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.0403785360444822 bayes_pls_golite062009
  • tubulin binding
    		•  0.0224163299030069 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.00954741955203087 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle