| Protein: | rec14 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 302 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rec14.
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..3] | [302..1159] |
|
|
356.0 | [0..5] | [302..1147] |
|
|
350.0 | [0..5] | [302..810] |
|
|
348.0 | [0..5] | [301..914] |
|
|
347.0 | [0..4] | [302..1074] |
|
Region A: Residues: [1-302] |
1 11 21 31 41 51
| | | | | |
1 MRKEYLVSHI EENAHQADIY SLNVVAGNLW SASGDSKIKK WSIGDAEHSL VEEIDTPHKL 60
61 GVHHLATSLD ENVVVSCGFG QDVYVWNPET NEFRDLGNNA QHPSECWSSC ISPDGQTIAF 120
121 TSVDGRIAVW DNPSDCKISE LDTKGKFGLC IDYSPNGRFI VSGHQTGQLF LISTETGRLF 180
181 HVLSGHTSPV RSVAFSPGST LLAAAGDSKM ITIYDVLSGD QVGQLRGHAA WIFAVAFNPV 240
241 GDLLLSADVE GKIKIWDIDT MECISTQSET DGAIWAVAWY KNGFIVAGAD KSIRWYRAAA 300
301 TE
|
| Detection Method: |  |
| Confidence: | 71.30103 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3.12192428374026 | bayes_pls_golite062009 | |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| RNA binding | 2.1927334052131 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.10036013463576 | bayes_pls_golite062009 |
| transcription regulator activity | 1.95667720244696 | bayes_pls_golite062009 |
| actin binding | 1.95169936993576 | bayes_pls_golite062009 |
| nucleic acid binding | 1.90457914882449 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.7032681012791 | bayes_pls_golite062009 |
| structural molecule activity | 1.47448876401574 | bayes_pls_golite062009 |
| DNA binding | 1.38475369554616 | bayes_pls_golite062009 |
| transporter activity | 0.807925044108643 | bayes_pls_golite062009 |
| transcription factor activity | 0.804334981068351 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.625780732991652 | bayes_pls_golite062009 |
| transcription repressor activity | 0.560226369775279 | bayes_pls_golite062009 |
| signal transducer activity | 0.526268909626683 | bayes_pls_golite062009 |
| molecular transducer activity | 0.526268909626683 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.48827205019881 | bayes_pls_golite062009 |
| transcription factor binding | 0.412844855996155 | bayes_pls_golite062009 |
| snoRNA binding | 0.347797037104681 | bayes_pls_golite062009 |
| protein transporter activity | 0.304660759584581 | bayes_pls_golite062009 |
| actin filament binding | 0.263920116138248 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.2578464839973 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.19391619547146 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.159676326911734 | bayes_pls_golite062009 |
| DNA helicase activity | 0.0403785360444822 | bayes_pls_golite062009 |
| tubulin binding | 0.0224163299030069 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.00954741955203087 | bayes_pls_golite062009 |
