General Information: |
|
Name(s) found: |
clr4 /
SPBC428.08c
[Sanger Pombe]
|
Description(s) found:
SHOW ONLY BEST |
|
Organism: | Schizosaccharomyces pombe |
Length: | 490 amino acids |
Gene Ontology: |
|
Cellular Component: |
mating-type region heterochromatin
[NAS]
nucleus [IDA] nuclear telomeric heterochromatin [NAS] CLRC ubiquitin ligase complex [IDA] nuclear centromeric heterochromatin [TAS] spindle pole body [IDA] |
Biological Process: |
regulation of production of siRNA involved in RNA interference
[IMP]
chromatin assembly or disassembly [IEA] donor selection [IMP] chromatin silencing at telomere [TAS] meiotic telomere clustering [IMP] dynein-driven meiotic oscillatory nuclear movement [IGI] chromatin remodeling [RCA] chromatin silencing at centromere [IMP] chromatin silencing at rDNA [IMP] histone methylation [IDA] regulation of Ran protein signal transduction [TAS] chromatin silencing at silent mating-type cassette [IMP] cellular protein localization [IGI] attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation [IMP] sphingolipid biosynthetic process [IMP] |
Molecular Function: |
zinc ion binding
[IEA]
protein binding [IPI] histone methyltransferase activity (H3-K9 specific) [IDA] chromatin binding [IEA] |
Sequence: |
|
Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSPKQEEYEV ERIVDEKLDR NGAVKLYRIR WLNYSSRSDT WEPPENLSGC SAVLAEWKRR 60 61 KRRLKGSNSD SDSPHHASNP HPNSRQKHQH QTSKSVPRSQ RFSRELNVKK ENKKVFSSQT 120 121 TKRQSRKQST ALTTNDTSII LDDSLHTNSK KLGKTRNEVK EESQKRELVS NSIKEATSPK 180 181 TSSILTKPRN PSKLDSYTHL SFYEKRELFR KKLREIEGPE VTLVNEVDDE PCPSLDFQFI 240 241 SQYRLTQGVI PPDPNFQSGC NCSSLGGCDL NNPSRCECLD DLDEPTHFAY DAQGRVRADT 300 301 GAVIYECNSF CSCSMECPNR VVQRGRTLPL EIFKTKEKGW GVRSLRFAPA GTFITCYLGE 360 361 VITSAEAAKR DKNYDDDGIT YLFDLDMFDD ASEYTVDAQN YGDVSRFFNH SCSPNIAIYS 420 421 AVRNHGFRTI YDLAFFAIKD IQPLEELTFD YAGAKDFSPV QSQKSQQNRI SKLRRQCKCG 480 481 SANCRGWLFG |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..88] | 8.09691 | Histone methyltransferase clr4, chromo domain | |
2 | View Details | [89..201] | N/A | No confident structure predictions are available. | |
3 | View Details | [202..490] | 62.522879 | SET domain of Clr4 |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 |
|
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)