YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: chp1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..183] PSI-BLAST 14.69897 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2
2 View Details [184..434] deduced N/A No confident structure predictions are available.
3 View Details [435..586] MSA 8.147994 View MSA. No confident structure predictions are available.
4 View Details [587..779] deduced N/A No confident structure predictions are available.
5 View Details [780..960] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription repressor activity
  • 4.08500855631983 bayes_pls_golite062009
  • transcription regulator activity
  • 3.64390820819794 bayes_pls_golite062009
  • methylated histone residue binding
  • 3.42338304360938 bayes_pls_golite062009
  • chromatin binding
  • 3.1924157640698 bayes_pls_golite062009
  • binding
  • 3.06758476214113 bayes_pls_golite062009
  • nucleic acid binding
  • 2.19167058827256 bayes_pls_golite062009
  • DNA binding
  • 2.05514577638135 bayes_pls_golite062009
  • histone binding
  • 2.00388175060339 bayes_pls_golite062009
  • protein binding
  • 1.61683263008775 bayes_pls_golite062009
  • general transcriptional repressor activity
  • 0.75184432495983 bayes_pls_golite062009
  • RNA binding
  • 0.503214578033104 bayes_pls_golite062009
  • transcription corepressor activity
  • 0.294457188332415 bayes_pls_golite062009
  • catalytic activity
  • 0.14067200158938 bayes_pls_golite062009
  • transcription activator activity
  • 0.136090220479238 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle