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Protein Overview: cce1

General Information:
Name(s) found: cce1 / SPAC25G10.02 [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • mitochondrial cruciform cutting endonuclease Cce1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 258 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: DNA recombination [IMPLink to PubMed article]
    mitochondrial genome maintenance [IMPLink to PubMed article]
    Molecular Function: magnesium ion binding [IEA]
    DNA binding [IMPLink to PubMed article]
    endodeoxyribonuclease activity [IMPLink to PubMed article]
    crossover junction endodeoxyribonuclease activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVKLSFLQ HICKLTGLSR SGRKDELLRR IVDSPIYPTS RVLGIDLGIK NFSYCFASQN  60
   61 EDSKVIIHNW SVENLTEKNG LDIQWTEDFQ PSSMADLSIQ LFNTLHEKFN PHVILMERQR 120
  121 YRSGIATIPE WTLRVNMLES MLYALHYAEK RNSIEQKIQY PFLLSLSPKS TYSYWASVLN 180
  181 TKASFSKKKS RVQMVKELID GQKILFENEE ALYKWNNGSR VEFKKDDMAD SALIASGWMR 240
  241 WQAQLKHYRN FCKQFLKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..258] PSI-BLAST 112.0 Mitochondrial resolvase ydc2 N-terminal domain; Mitochondrial resolvase ydc2 catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nuclease activity
    		•  2.26556994009539 bayes_pls_golite062009
  • exonuclease activity
    		•  2.2254764376369 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.75713164321634 bayes_pls_golite062009
  • hydrolase activity
    		•  1.52863974928789 bayes_pls_golite062009
  • catalytic activity
    		•  1.25233849524628 bayes_pls_golite062009
  • ribonuclease activity
    		•  1.21758166782745 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  1.19309748194103 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  1.1219517187744 bayes_pls_golite062009
  • binding
    		•  0.777766550398053 bayes_pls_golite062009
  • DNA polymerase activity
    		•  0.717600245625866 bayes_pls_golite062009
  • endonuclease activity
    		•  0.635517699603511 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
    		•  0.568273228950698 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  0.4571735090405 bayes_pls_golite062009
  • transcription factor binding
    		•  0.39731466816166 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.32137240853612 bayes_pls_golite062009
  • exodeoxyribonuclease activity
    		•  0.278838342302102 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  0.264176022241505 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  0.261428436029202 bayes_pls_golite062009
  • protein binding
    		•  0.242714557118293 bayes_pls_golite062009
  • SUMO ligase activity
    		•  0.17047695151047 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.129994528216387 bayes_pls_golite062009
  • ligase activity
    		•  0.0697252959635399 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle