Description(s) found:
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gi|68845820|sp|P43125.2|RDGB_DROME RecName: Full=Protein retinal degeneration B; AltName: Full=Probable calcium transporter rdgB
[NCBI NR]
gi|62473700|ref|NP_001014741.1| retinal degeneration B, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|62473687|ref|NP_001014740.1| retinal degeneration B, isoform D [Drosophila melanogaster]
[NCBI NR]
gi|61677899|gb|AAX52495.1| retinal degeneration B, isoform D [Drosophila melanogaster]
[NCBI NR]
gi|61677898|gb|AAX52494.1| retinal degeneration B, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|24641867|ref|NP_727733.1| retinal degeneration B, isoform A [Drosophila melanogaster]
[NCBI NR]
gi|22832222|gb|AAF48316.2| retinal degeneration B, isoform A [Drosophila melanogaster]
[NCBI NR]
gi|15291155|gb|AAK92846.1| GH09970p [Drosophila melanogaster]
[NCBI NR]
Protein retinal degeneration B OS=Drosophila melanogaster GN=rdgB PE=1 SV=2
[Swiss-Prot]
The gene retinal degeneration B is referred to in FlyBase by the symbol Dmel\rdgB (CG11111, FBgn0003218). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:13656803..13670782. It has the cytological map location 12C1-12C4. There is experimental evidence that it has the molecular function</span>: phosphatidylcholine transmembrane transporter activity; phosphatidylinositol transporter activity. There is experimental evidence that it is involved in the biological process</span>: rhodopsin mediated signaling pathway; phototransduction; phosphoinositide metabolic process; deactivation of rhodopsin mediated signaling; sensory perception of smell. 48 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: external compound sense organ; peripheral nervous system; nervous system; compound cell cluster organ; adult segment; rhabdomere R7; mouthpart; rhabdomere; integumentary plate; cell projection; multi-cell-component structure. It has 8 annotated transcripts and 8 annotated polypeptides.
[FlyBase]
>CG11111-PA translation from_gene[CG11111 rdgB FBgn0003218] seq_release:3 mol_weight=138897 cds_boundaries:(X:13,498,739..13,507,389[+]) aa_length:1259 transcript_info:[CG11111-RA seq_release:3] gene_info:[gene symbol:rdgB FBgn0003218 gene_boundaries:(
[hmr_yeast5_DM3-1_pombe.fasta]
(Q961R2) GH09970p (CG11111-PA)
[DrosMelano7227.FASTAC.txt]
CG11111-PA, isoform A [Drosophila melanogaster]gi|24641867|ref|NP_727733.1| CG11111-PA [Drosophila melanogaster]gi|15291155|gb|AAK92846.1| GH09970p [Drosophila melanogaster]
[nrdb_11152004_Chlamydomonas]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0099560; nam
[fly-100309-contam.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0099561; nam
[fly-100309-contam.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0073653; nam
[fly-100309-contam.fasta]
retinal degeneration B CG11111-PC, isoform C [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG11111-PC, isoform C [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG11111-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
retinal degeneration B CG11111-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG11111-PD, isoform D [Drosophila melanogaster]
[nr-271106-contam.fasta]
Protein retinal degeneration B (Probable calcium transporter rdgB)
[nr-271106-contam.fasta]
GH09970p [Drosophila melanogaster]
[nr-271106-contam.fasta]
retinal degeneration B CG11111-PD, isoform D [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0099560; name=rdgB-PC; parent=FBgn0003218,FBtr0100194; dbxref=FlyBase_Annotation_IDs:CG11111-PC,FlyBase:FBpp0099560,GB_protein:AAX52494.1,REFSEQ:NP_001014741,GB_protein:AAX52494; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0099561; name=rdgB-PD; parent=FBgn0003218,FBtr0100195; dbxref=FlyBase_Annotation_IDs:CG11111-PD,FlyBase:FBpp0099561,GB_protein:AAX52495.1,REFSEQ:NP_001014740,GB_protein:AAX52495; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0073653; name=rdgB-PA; parent=FBgn0003218,FBtr0073822; dbxref=FlyBase:FBpp0073653,FlyBase_Annotation_IDs:CG11111-PA,GB_protein:AAF48316.2,REFSEQ:NP_727733,GB_protein:AAF48316; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0099560; name=rdgB-PC; parent=FBgn0003218,FBtr0100194; dbxref=FlyBase_Annotation_IDs:CG11111-PC,FlyBase:FBpp0099560,GB_protein:AAX52494.1,REFSEQ:NP_001014741,GB_protein:AAX52494; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0099561; name=rdgB-PD; parent=FBgn0003218,FBtr0100195; dbxref=FlyBase_Annotation_IDs:CG11111-PD,FlyBase:FBpp0099561,GB_protein:AAX52495.1,REFSEQ:NP_001014740,GB_protein:AAX52495; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0073653; name=rdgB-PA; parent=FBgn0003218,FBtr0073822; dbxref=FlyBase:FBpp0073653,FlyBase_Annotation_IDs:CG11111-PA,GB_protein:AAF48316.2,REFSEQ:NP_727733,GB_protein:AAF48316; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0099560; name=rdgB-PC; parent=FBgn0003218,FBtr0100194; dbxref=FlyBase_Annotation_IDs:CG11111-PC,FlyBase:FBpp0099560,GB_protein:AAX52494.1,REFSEQ:NP_001014741,GB_protein:AAX52494,FlyMine:FBpp0099560,modMine:FBpp0099560; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0099561; name=rdgB-PD; parent=FBgn0003218,FBtr0100195; dbxref=FlyBase_Annotation_IDs:CG11111-PD,FlyBase:FBpp0099561,GB_protein:AAX52495.1,REFSEQ:NP_001014740,GB_protein:AAX52495; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=X:join(13662113..13662190,13662692..13662836,13662902..13663093,13663177..13663587,13663844..13664175,13665161..13665236,13665310..13666518,13666591..13666728,13666819..13667786,13667839..13668011,13670709..13670766); ID=FBpp0073653; name=rdgB-PA; parent=FBgn0003218,FBtr0073822; dbxref=FlyBase:FBpp0073653,FlyBase_Annotation_IDs:CG11111-PA,GB_protein:AAF48316.2,REFSEQ:NP_727733,GB_protein:AAF48316; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0099560; name=rdgB-PC; parent=FBgn0003218,FBtr0100194; dbxref=FlyBase_Annotation_IDs:CG11111-PC,FlyBase:FBpp0099560,GB_protein:AAX52494.1,REFSEQ:NP_001014741,GB_protein:AAX52494,FlyMine:FBpp0099560,modMine:FBpp0099560; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0099561; name=rdgB-PD; parent=FBgn0003218,FBtr0100195; dbxref=FlyBase_Annotation_IDs:CG11111-PD,FlyBase:FBpp0099561,GB_protein:AAX52495.1,REFSEQ:NP_001014740,GB_protein:AAX52495; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0073653; name=rdgB-PA; parent=FBgn0003218,FBtr0073822; dbxref=FlyBase:FBpp0073653,FlyBase_Annotation_IDs:CG11111-PA,GB_protein:AAF48316.2,REFSEQ:NP_727733,GB_protein:AAF48316; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0099560; name=rdgB-PC; parent=FBgn0003218,FBtr0100194; dbxref=FlyBase_Annotation_IDs:CG11111-PC,FlyBase:FBpp0099560,GB_protein:AAX52494.1,REFSEQ:NP_001014741,GB_protein:AAX52494,FlyMine:FBpp0099560,modMine:FBpp0099560; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0099561; name=rdgB-PD; parent=FBgn0003218,FBtr0100195; dbxref=FlyBase_Annotation_IDs:CG11111-PD,FlyBase:FBpp0099561,GB_protein:AAX52495.1,REFSEQ:NP_001014740,GB_protein:AAX52495; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0073653; name=rdgB-PA; parent=FBgn0003218,FBtr0073822; dbxref=FlyBase:FBpp0073653,FlyBase_Annotation_IDs:CG11111-PA,GB_protein:AAF48316.2,REFSEQ:NP_727733,GB_protein:AAF48316; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
FBpp0099560 type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0099560; name=rdgB-PC; parent=FBgn0003218,FBtr0100194; dbxref=FlyBase_Annotation_IDs:CG11111-PC,FlyBase:FBpp0099560,GB_protein:AAX52494.1,REFSEQ:NP_001014741,GB_protein:AAX52494,FlyMine:FBpp0099560,modMine:FBpp0099560; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0099561 type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0099561; name=rdgB-PD; parent=FBgn0003218,FBtr0100195; dbxref=FlyBase_Annotation_IDs:CG11111-PD,FlyBase:FBpp0099561,GB_protein:AAX52495.1,REFSEQ:NP_001014740,GB_protein:AAX52495; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0073653 type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0073653; name=rdgB-PA; parent=FBgn0003218,FBtr0073822; dbxref=FlyBase:FBpp0073653,FlyBase_Annotation_IDs:CG11111-PA,GB_protein:AAF48316.2,REFSEQ:NP_727733,GB_protein:AAF48316; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0099560; name=rdgB-PC; parent=FBgn0003218,FBtr0100194; dbxref=FlyBase_Annotation_IDs:CG11111-PC,FlyBase:FBpp0099560,GB_protein:AAX52494.1,REFSEQ:NP_001014741,GB_protein:AAX52494,UniProt/Swiss-Prot:P43125,FlyMine:FBpp0099560,modMine:FBpp0099560; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0099561; name=rdgB-PD; parent=FBgn0003218,FBtr0100195; dbxref=FlyBase_Annotation_IDs:CG11111-PD,FlyBase:FBpp0099561,GB_protein:AAX52495.1,REFSEQ:NP_001014740,GB_protein:AAX52495,UniProt/Swiss-Prot:P43125; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=X:join(13768080..13768157,13768659..13768803,13768869..13769060,13769144..13769554,13769811..13770142,13771128..13771203,13771277..13772485,13772558..13772695,13772786..13773753,13773806..13773978,13776676..13776733); ID=FBpp0073653; name=rdgB-PA; parent=FBgn0003218,FBtr0073822; dbxref=FlyBase:FBpp0073653,FlyBase_Annotation_IDs:CG11111-PA,GB_protein:AAF48316.2,REFSEQ:NP_727733,GB_protein:AAF48316,UniProt/Swiss-Prot:P43125; MD5=1e7c69a966c033793403f7f6edf028a5; length=1259; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
|