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Protein Overview: chrb-PC, FBpp0304225

General Information:
Name(s) found: FBpp0304225 [FlyBase]
chrb-PC / FBpp0099774 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • type=protein; loc=3L:join(11481635..11481701,11487190..11487832,11487946..11488056,11488117..11488195); ID=FBpp0304225; name=chrb-PD; parent=FBgn0036165,FBtr0331841; dbxref=FlyBase:FBpp0304225,FlyBase_Annotation_IDs:CG7533-PD,REFSEQ:NP_001261711,GB_protein:AGB94405; MD5=65604b107b4165d757b9df274490d2ed; length=299; release=r5.56; species=Dmel; [FlyBase]
  • The gene charybde is referred to in FlyBase by the symbol Dmel\chrb (CG7533, FBgn0036165). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:11480660..11490429. It has the cytological map location 68C10. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: negative regulation of growth; head involution; cell death. 21 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: negative regulation of growth [IGI]
    negative regulation of signal transduction [IEA]
    cell death [IMP]
    head involution [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMEVLSVQN HIQGKFGVNK IKDWQASTAP LEEEEELTAG VNGNTAAGEG ILDVDVVDGH  60
   61 PASVLHMRQH QALNTRPSAT PPSAGGGGPL AGGGSVGMTT PKQATSPVAA ASFEAPLSGG 120
  121 SAAAYHHAYM TNVLSSTAQQ HHPLPASPLQ STACARFGAA DNLDDVSASA VRELSQQLQA 180
  181 QLRDAKRRHL ACTEVTLPND LTQRIAAEII RMSEREPCGE RACTLFIEFE SEPNKVKRIA 240
  241 YFKVDPDTVS IFELYLTLRQ DKSGWSSLVP QFIKNLTRSN TINISPDFTL TKKKLYSSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] deduced N/A No confident structure predictions are available.
    2 View Details [146..299] Pfam 72.229148 No description for PF07809.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle