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Protein Overview: retn-PB

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..278] deduced N/A No confident structure predictions are available.
2 View Details [279..397] PSI-BLAST 16.30103 Solution Structure of the SWI1 ARID
3 View Details [398..519] deduced N/A No confident structure predictions are available.
4 View Details [520..740] PSI-BLAST 6.0 Sec24
5 View Details [741..911] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • transcription regulator activity
  • 4.55411292098115 bayes_pls_golite062009
  • DNA binding
  • 4.42692928312159 bayes_pls_golite062009
  • nucleic acid binding
  • 4.31553768044343 bayes_pls_golite062009
  • transcription activator activity
  • 3.52298398128865 bayes_pls_golite062009
  • binding
  • 2.97217702905299 bayes_pls_golite062009
  • transcription repressor activity
  • 2.80681923216447 bayes_pls_golite062009
  • transcription factor activity
  • 2.58593134374376 bayes_pls_golite062009
  • protein binding
  • 1.76687312643483 bayes_pls_golite062009
  • transcription factor binding
  • 1.28734696305262 bayes_pls_golite062009
  • transcription cofactor activity
  • 1.13378621684772 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.06026105710513 bayes_pls_golite062009
  • transcription coactivator activity
  • 1.04454363470311 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.46237393414621 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle