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Protein Overview: Ranbp11-PA

General Information:
Name(s) found: Ranbp11-PA / FBpp0086416 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • The gene Ranbp11 is referred to in FlyBase by the symbol Dmel\Ranbp11 (CG33139, FBgn0053139). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:11570221..11574925. It has the cytological map location 52B5. It is reported to have molecular function</span>: Ran GTPase binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: intracellular protein transport. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1075 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: intracellular protein transport [IEA]
    Molecular Function: protein transporter activity [IEA]
    binding [IEA]
    Ran GTPase binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMATGAVSG AAAAGAGASV EQLVAQTLQA ATNPSHEIVQ KAEAQLREWE QQPGFFPTIA  60
   61 RLSMRRGGGG DVVSSTEDSE VKVRWMAAVY LKNGVERYWR PNSRQELPAE QKQQIREVLL 120
  121 RHYDAEEVPQ VALQVAVLLG RLARTDYPRF WPDLLPTLMK QLQSCGTDGD SALQQRILIV 180
  181 LHYVLKALAS RRLMAEQRAF QELGLQIFGY LAWDIWAPLT TRFLQLVRKD EAMALNALQR 240
  241 AYVVMRTLRK LVVYGCAKPY KSTDHMNFVE QLFQRLRQCL ELRYELKVGS ATPGTATILT 300
  301 ELERFVIKMM KTLNELMERH SVSFARFVPV ALEFSFHYVF HEGTALIFDA GDRINFKNFA 360
  361 IQALNMLKGI MLSGNDSISA PPEGGAHIED ELLASAAQSQ AKFFTAERVT YICEKIVTHY 420
  421 FLLTQQELEE WQQDPEGYDQ DDGGGDAWKY ALRPSVETLY FTCFTQHSQV MIPEVLRFVR 480
  481 RAQQLQLTPE SDLKAILLKD AIYNAVGQAA FHFFNKLDFG AWLTSQLLAE LRVEALNFRI 540
  541 LRRRIIWLVG HWVGVQLPRE LRPLAYEACL HLLRPQEDMP TRLAAARTLN LLIDDFEFMP 600
  601 EAFHPYFPSL FEALFLLLHE AGECDTKIVV LGTMTLLVEK MSEYIEPQAL QFIAYLPLLW 660
  661 RESEEHDLLR CAIIGTLEQL VRTIRDVPEP MKPFLYSVIE LSTDLQQPSH VYLIEDGIML 720
  721 WLAVIGNSTA LTPELLGLCD HLLPIIEMSS ENLRTVLQLI HAYILLDAQA YLSRYGEGFV 780
  781 AYCVRSFEDI RVEGIIAMLR IIETCLKTDA ALGLRLVRPA LPFVFQQVCL KQEYPMTMGW 840
  841 YLTIVARTLL IDQSVFMSVV QQLPQADALA RILDVWIEMF PMVPDTHAEK RKLFCLAFAS 900
  901 IFGSNELLLA RLPHILQLVD ETLGEVMDKQ YAATEEGASQ ATPRFYDSLV IHDEHELDDL 960
  961 QQQLGSGGGV SEEFHTKGYP AKTYHDDRHR QLVLKDPVYK IPLTEYLKWQ LQSLQAQLGS1020
 1021 QRYEQVMCSV VPEVRERITM YIEQTVPKAC VVCAGSGSGS GAPADRTLSE QVESG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1075] PSI-BLAST 68.09691 The exportin Cse1 in its cargo-free, cytoplasmic state

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein transporter activity
    		•  4.58709163830613 bayes_pls_golite062009
  • binding
    		•  3.0667965351474 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  2.74547353635661 bayes_pls_golite062009
  • transporter activity
    		•  2.48700774379895 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.26725422172281 bayes_pls_golite062009
  • nuclear export signal receptor activity
    		•  2.13470398426489 bayes_pls_golite062009
  • RNA binding
    		•  1.91507786651888 bayes_pls_golite062009
  • nuclear localization sequence binding
    		•  1.91487015967262 bayes_pls_golite062009
  • protein binding
    		•  1.73688475473996 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.28481004323799 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.09652988954158 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.00841167631924 bayes_pls_golite062009
  • signal sequence binding
    		•  0.84634722220211 bayes_pls_golite062009
  • signal transducer activity
    		•  0.662662274021266 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.662662274021266 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.385452858197632 bayes_pls_golite062009
  • mRNA binding
    		•  0.37278269424461 bayes_pls_golite062009
  • DNA binding
    		•  0.309260217284589 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.252495966234234 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.248585912061178 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.226380819487924 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.217517113570989 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.178770060806735 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.175241020572885 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.174922130116569 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.100181463251306 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.0635404099346928 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.0548082069333885 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.052195223119721 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.0405268469927988 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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