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Protein Overview: Chrac-14-PB

General Information:
Name(s) found: Chrac-14-PB / FBpp0099657 [FlyBase]
Description(s) found:
Found 39 descriptions.
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  • The gene Chrac-14 is referred to in FlyBase by the symbol Dmel\Chrac-14 (CG13399, FBgn0043002). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:8437411..8442352. It has the cytological map location 29C4-29C5. There is experimental evidence that it has the molecular function</span>: protein binding; protein heterodimerization activity. There is experimental evidence that it is involved in the biological process</span>: cellular response to DNA damage stimulus; nucleosome mobilization. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 128 amino acids

    Gene Ontology:
    Cellular Component: chromatin accessibility complex [IDA][NAS]
    Biological Process: response to DNA damage stimulus [IMP]
    nucleosome mobilization [IDA]
    Molecular Function: protein binding [IPI]
    protein heterodimerization activity [IPI]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVERIEDLNL PNAVIGRLIK EALPESASVS KEARAAIARA ASVFAIFVTS SSTALAHKQN  60
   61 HKTITAKDIL QTLTELDFES FVPSLTQDLE VYRKVVKEKK ESKASKKDSN TAENANASAT 120
  121 ATAEEAPE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. Chrac-14-PB gi|93279411

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 20.221849 Histone fold heterodimer of the Chromatin Accessibility Complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.581886805340955 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle