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Protein Overview: VATL_RAT

General Information:
Name(s) found: VATL_RAT [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus GN=Atp6v0c PE=2 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 155 amino acids

    Gene Ontology:
    Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) [IEA]
    membrane [IEA]
    integral to membrane [IEA]
    Golgi apparatus [IDA]
    proton-transporting V-type ATPase, V0 domain [IEA]
    vacuolar membrane [IEA]
    vacuole [IEA]
    lysosome [IDA]
    Biological Process: ion transport [IEA]
    proton transport [IEA]
    ATP synthesis coupled proton transport [IEA]
    Molecular Function: ATPase activity, coupled to transmembrane movement of ions [NAS]
    protein binding [UNKNOWN]
    hydrogen ion transmembrane transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADIKNNPEY SSFFGVMGAS SAMVFSAMGA AYGTAKSGTG IAAMSVMRPE LIMKSIIPVV  60
   61 MAGIIAIYGL VVAVLIANSL TDGITLYRSF LQLGAGLSVG LSGLAAGFAI GIVGDAGVRG 120
  121 TAQQPRLFVG MILILIFAEV LGLYGLIVAL ILSTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 26.30103 The membrane rotor of the V-type ATPase from Enterococcus hirae


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle