YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: MYL6B_MOUSE

General Information:
Name(s) found: MYL6B_MOUSE [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|94388992|ref|XP_983476.1| PREDICTED: similar to myosin light chain 1 slow a [Mus musculus] [NCBI NR]
  • gi|81878172|sp|Q8CI43.1|MYL6B_MOUSE RecName: Full=Myosin light chain 6B; AltName: Full=Smooth muscle and nonmuscle myosin light chain alkali 6B [NCBI NR]
  • gi|26986555|ref|NP_758463.1| myosin, light polypeptide 6B [Mus musculus] [NCBI NR]
  • gi|22789245|gb|AAH37527.1| Myosin, light polypeptide 6B [Mus musculus] [NCBI NR]
  • gi|148692631|gb|EDL24578.1| myosin, light polypeptide 6B [Mus musculus] [NCBI NR]
  • Myosin light chain 6B OS=Mus musculus GN=Myl6b PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):10-128519012 Similar to myosin light chain 1 slow a [hmr_yeast5_DM3-1_pombe.fasta]
  • myosin light chain 1 slow a [HMR_022704-rand.fasta]
  • Myosin light chain 1 slow a [ipi.MOUSE.v3.06.fasta]
  • myosin light chain 1 slow a [Mus musculus]gi|22789245|gb|AAH37527.1| Myosin light chain 1 slow a [Mus musculus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Myosin light chain 1 slow a [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • myosin light chain 1 slow a isoform 1 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • PREDICTED: similar to myosin light chain 1 slow a isoform 3 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • myosin light chain 1 slow a [Mus musculus] [NCBI-RefSeq_mouse_na_03-19-2007_reversed.fasta]
  • PREDICTED: similar to myosin light chain 1 slow a [Mus musculus] [NCBI-RefSeq_mouse_na_03-19-2007_reversed.fasta]
  • Myosin light chain 6B (Smooth muscle and nonmuscle myosin light chain alkali 6B) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • myosin, light polypeptide 6B [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Myosin, light polypeptide 6B [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MYOSIN LIGHT CHAIN 1 SLOW A [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Myl6b Myosin light chain 6B [mouse-ipi-250309-contam.fasta]
  • Myosin light polypeptide 6B (Smooth muscle and nonmuscle myosin light chain alkali 6B) [nr-271106-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Myl6b Myosin light polypeptide 6B [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Myl6b Myosin light polypeptide 6B ENSMUSG00000039824 IPI00261638 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • myosin light chain 6B [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00261638.1|SWISS-PROT:Q8CI43|ENSEMBL:ENSMUSP00000026428|REFSEQ:NP_758463 Tax_Id=10090 Gene_Symbol=Myl6b Myosin light chain 6B [ipi.MOUSE.fasta.20090209]
  • Myosin light chain 6B OS=Mus musculus GN=Myl6b [011711_HMR.fasta]
  • Myosin light chain 6B OS=Mus musculus GN=Myl6b PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q8CI43|MYL6B_MOUSE Myosin light chain 6B OS=Mus musculus GN=Myl6b PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: myosin complex [TAS]
    unconventional myosin complex [TAS]
    Biological Process: muscle contraction [TAS]
    skeletal muscle tissue development [TAS]
    muscle filament sliding [TAS]
    Molecular Function: structural constituent of muscle [TAS]
    calcium ion binding [IEA]
    motor activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKKDAPVK KPAGPSISKP AAKSTPGTPL AKAKAEPAAP QAPAKSQEPP VDLSKVVIEF  60
   61 NKDQLEEFRE AFELFDRVGD GKILYSQCGD LMRALGQNPT NAEVLKVLGN PKNEELKSRR 120
  121 VDFETFLPML QAVAKNRDQG TYEDYLEGLR VFDKEGNGKV MGAELRHVLT TLGEKMTEEE 180
  181 VETVLAGHED SNGCINYEAF LKHILSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..65] PSI-BLAST 3.69897 CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT
    2 View Details [66..207] PSI-BLAST 31.0 Crystal structure of Myosin V nucleotide-free

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • troponin T binding
    		•  7.68526659589559 bayes_pls_golite062009
  • structural constituent of muscle
    		•  6.34041234021534 bayes_pls_golite062009
  • actin-dependent ATPase activity
    		•  6.31366142616096 bayes_pls_golite062009
  • N-terminal myristoylation domain binding
    		•  5.746886320739 bayes_pls_golite062009
  • microfilament motor activity
    		•  5.62061944255026 bayes_pls_golite062009
  • G-protein beta/gamma-subunit binding
    		•  5.51712867097471 bayes_pls_golite062009
  • myosin II heavy chain binding
    		•  5.49688740358168 bayes_pls_golite062009
  • actin binding
    		•  3.96919556235483 bayes_pls_golite062009
  • calcium ion binding
    		•  3.79609619542776 bayes_pls_golite062009
  • myosin heavy chain binding
    		•  3.63014173976595 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  3.49668552859347 bayes_pls_golite062009
  • motor activity
    		•  3.25814691068414 bayes_pls_golite062009
  • binding
    		•  3.17556402087346 bayes_pls_golite062009
  • metal ion binding
    		•  2.62077305565026 bayes_pls_golite062009
  • cation binding
    		•  2.62077305565026 bayes_pls_golite062009
  • ion binding
    		•  2.61312132078717 bayes_pls_golite062009
  • tubulin binding
    		•  2.51210014078446 bayes_pls_golite062009
  • actin filament binding
    		•  2.35534489389161 bayes_pls_golite062009
  • myosin binding
    		•  2.34125070430971 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.29802198409541 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.28098452079347 bayes_pls_golite062009
  • calcium sensitive guanylate cyclase activator activity
    		•  2.25146252368284 bayes_pls_golite062009
  • microtubule binding
    		•  2.17136406283012 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.12961051741613 bayes_pls_golite062009
  • structural molecule activity
    		•  2.02132683356917 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.82714164083189 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.74951443813569 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.51057181410195 bayes_pls_golite062009
  • kinase activity
    		•  1.48008348280256 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.43263098461462 bayes_pls_golite062009
  • DNA binding
    		•  1.40714762620388 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.34982153616582 bayes_pls_golite062009
  • protein binding
    		•  1.16246005294206 bayes_pls_golite062009
  • transporter activity
    		•  1.15928534291452 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.11607939838219 bayes_pls_golite062009
  • signal transducer activity
    		•  1.11607939838219 bayes_pls_golite062009
  • transferase activity
    		•  1.00143834284844 bayes_pls_golite062009
  • actin monomer binding
    		•  0.9954841049256 bayes_pls_golite062009
  • nitric-oxide synthase binding
    		•  0.965098383344279 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.945691505472547 bayes_pls_golite062009
  • cation channel activity
    		•  0.856991182112951 bayes_pls_golite062009
  • cyclase regulator activity
    		•  0.84389905735679 bayes_pls_golite062009
  • guanylate cyclase regulator activity
    		•  0.84389905735679 bayes_pls_golite062009
  • hydrolase activity
    		•  0.460408471514041 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.438908712437433 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.366129174039334 bayes_pls_golite062009
    		• 0.34446792626966 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  0.341357838238159 bayes_pls_golite062009
  • channel regulator activity
    		•  0.32809521759917 bayes_pls_golite062009
  • myosin II binding
    		•  0.311147527050891 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  0.308919475701377 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  0.304496519713588 bayes_pls_golite062009
  • potassium channel activity
    		•  0.260530997378698 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.246383459363256 bayes_pls_golite062009
  • ER retention sequence binding
    		•  0.234166588492671 bayes_pls_golite062009
  • gated channel activity
    		•  0.175191914660841 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  0.157059988605635 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.116648335890738 bayes_pls_golite062009
  • channel activity
    		•  0.0711800677928949 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.0711800677928949 bayes_pls_golite062009
  • receptor binding
    		•  0.0645779132227158 bayes_pls_golite062009
  • ion channel activity
    		•  0.0166394982861724 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle