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Protein Overview: PVH1_SCHPO

General Information:
Name(s) found: PVH1_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19112380|ref|NP_595588.1| protein tyrosine phosphatase [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • Tyrosine-protein phosphatase yvh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yvh1 PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKSAWQPQ FDEIHSSVQE AEGFLQSSND VQKAIDEVHY PDSLNDLSEI SKNLYISSWK  60
   61 TASELVSTSD KGIDYTLSAM SINPNLSVPE QQHLWLQIED SSSQNILQYF EKSNKFIAFA 120
  121 LSKNAKVLVH CFAGISRSVT LVAAYLMKEN NWNTEEALSH INERRSGISP NANFLRQLRV 180
  181 YFECNYQLDR SLRPYRQWLF RRYGDFAVLN TRVPSEVAYA ETVRARAGQL ELRCKKCRFV 240
  241 LASSDYLVSH EPKDENNYSH TRCTHYFLEP IRWMQPELEL GNLEGRFDCP KCNSKIGSYK 300
  301 WQGLQCSCLQ WVCPALSILQ SRVDAVRKLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] PSI-BLAST 35.522879 Crystal structure of JSP-1
    2 View Details [207..330] FFAS03 0.968 No description for 2dlqA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  3.68743405828801 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.68045904515072 bayes_pls_golite062009
  • DNA binding
    		•  3.67134559212672 bayes_pls_golite062009
  • binding
    		•  2.99742524370422 bayes_pls_golite062009
  • transcription factor activity
    		•  2.74156749164617 bayes_pls_golite062009
  • protein binding
    		•  2.00293511941456 bayes_pls_golite062009
  • transcription activator activity
    		•  1.65132234119107 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.59379135382987 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.16015561891665 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.02112591326973 bayes_pls_golite062009
  • transcription factor binding
    		•  0.992551517825148 bayes_pls_golite062009
  • chromatin binding
    		•  0.882614685845383 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.77786753211873 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.429714523640337 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  0.356308409912021 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.336256827445227 bayes_pls_golite062009
  • catalytic activity
    		•  0.263007611601737 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle