| Protein: | PVH1_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 330 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PVH1_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..26] | [329..6] |
|
|
276.0 | [0..27] | [329..7] |
|
|
273.0 | [0..20] | [329..1] |
|
|
271.0 | [0..20] | [329..1] |
|
|
270.0 | [0..29] | [329..8] |
|
|
268.0 | [0..19] | [329..13] |
|
|
264.0 | [0..28] | [329..2] |
|
|
248.0 | [0..46] | [325..11] |
|
|
247.0 | [0..47] | [329..1] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MSNKSAWQPQ FDEIHSSVQE AEGFLQSSND VQKAIDEVHY PDSLNDLSEI SKNLYISSWK 60
61 TASELVSTSD KGIDYTLSAM SINPNLSVPE QQHLWLQIED SSSQNILQYF EKSNKFIAFA 120
121 LSKNAKVLVH CFAGISRSVT LVAAYLMKEN NWNTEEALSH INERRSGISP NANFLRQLRV 180
181 YFECNYQLDR SLRPYRQWLF RRYGDF
|
| Detection Method: |  |
| Confidence: | 35.522879 |
| Match: | 1wrmA |
| Description: | Crystal structure of JSP-1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [207-330] |
1 11 21 31 41 51
| | | | | |
1 AVLNTRVPSE VAYAETVRAR AGQLELRCKK CRFVLASSDY LVSHEPKDEN NYSHTRCTHY 60
61 FLEPIRWMQP ELELGNLEGR FDCPKCNSKI GSYKWQGLQC SCLQWVCPAL SILQSRVDAV 120
121 RKLG
|
| Detection Method: | |
| Confidence: | 0.968 |
| Match: | 2dlqA |
| Description: | No description for 2dlqA was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 3.68743405828801 | bayes_pls_golite062009 |
| nucleic acid binding | 3.68045904515072 | bayes_pls_golite062009 |
| DNA binding | 3.67134559212672 | bayes_pls_golite062009 |
| binding | 2.99742524370422 | bayes_pls_golite062009 |
| transcription factor activity | 2.74156749164617 | bayes_pls_golite062009 |
| protein binding | 2.00293511941456 | bayes_pls_golite062009 |
| transcription activator activity | 1.65132234119107 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.59379135382987 | bayes_pls_golite062009 |
| transcription repressor activity | 1.16015561891665 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.02112591326973 | bayes_pls_golite062009 |
| transcription factor binding | 0.992551517825148 | bayes_pls_golite062009 |
| chromatin binding | 0.882614685845383 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.77786753211873 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.429714523640337 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.356308409912021 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.336256827445227 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
