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Protein Overview: gi|7159330, gi|6...

General Information:
Name(s) found: gi|7159330 [NCBI NR]
gi|6754464 [NCBI NR]
gi|3165398 [NCBI NR]
Description(s) found:
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  • gi|7159330|gb|AAF37722.1|AF237686_1 MHC class I recognition receptor Ly49I [Mus musculus] [NCBI NR]
  • gi|6754464|ref|NP_034781.1| killer cell lectin-like receptor subfamily A, member 9 [Mus musculus] [NCBI NR]
  • gi|3165398|gb|AAC17703.1| natural killer cell receptor Ly49C [Mus musculus] [NCBI NR]
  • Ensembl_locations(Chr-bp):None MHC class I recognition receptor Ly49I [hmr_yeast5_DM3-1_pombe.fasta]
  • killer cell lectin-like receptor subfamily A, member 9 [HMR_022704-rand.fasta]
  • MHC class I recognition receptor Ly49I [Mus musculus]gi|6754464|ref|NP_034781.1| killer cell lectin-like receptor subfamily A, member 9 [Mus musculus]gi|3165398|gb|AAC17703.1| natural killer cell receptor Ly49C [Mus musculus] [nrdb_11152004_Chlamydomonas]
  • MHC class I recognition receptor Ly49I [ipi.MOUSE.v3.06.fasta]
  • Tax_Id=10090 MHC class I recognition receptor Ly49I [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_010651) killer cell lectin-like receptor subfamily A, member 9 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • killer cell lectin-like receptor subfamily A, member 9 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • MHC class I recognition receptor Ly49I [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • natural killer cell receptor Ly49C [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MHC CLASS I RECOGNITION RECEPTOR LY49I [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Klra9 Natural killer cell receptor Ly49C [EBI-IPI_mouse_01-01-2009_reversed.fasta]
  • tr|Q9JHN9|Q9JHN9_MOUSE MHC class I recognition receptor Ly49I OS=Mus musculus GN=Klra9 PE=1 SV=1 [uniprot.sptr.mouse.20130102]
  • MHC class I recognition receptor Ly49I OS=Mus musculus GN=Klra9 PE=1 SV=1 [mouse-uniprot-290313-contam.fasta]
  • MHC class I recognition receptor Ly49I OS=Mus musculus PE=1 SV=1 [mouse-uniprot-oct2014-contam.fasta]
    • Organism: Mus musculus
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPEVTYST VRFHKSSGLQ KLVRHEETQG PREAGNRKCS VSWQLIVKAL GILCFLLLVI  60
   61 VAVLTIKIFQ YSQHKQEINE TLNHHHNCSN MQRDFNLKEE MLTNKSIDCR PSNEILEYIK 120
  121 REQDRWDSET KTVLDSSRDT GRGVKYWFCY GTKCYYFIMN KTTWSGCKAN CQHYSVPIVK 180
  181 IEDEDELKFL QRHVIPEGYW IGLSYDKKKK EWAWIDNGPS KFDMKIRKMN FKSRGCVFLS 240
  241 KARIEDTDCN IPYYCICGKK LDKFPD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] Pfam 58.455932 No description for PF08391.1 was found. No confident structure predictions are available.
    2 View Details [142..266] PSI-BLAST 25.0 NK cell receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • zymosan binding
    		•  6.19709531947955 bayes_pls_golite062009
  • polysaccharide receptor activity
    		•  4.47886057498833 bayes_pls_golite062009
  • zymosan receptor activity
    		•  4.47886057498833 bayes_pls_golite062009
  • receptor activity
    		•  3.98996960244405 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  3.91893667918626 bayes_pls_golite062009
  • MHC class Ib receptor activity
    		•  3.61992868801251 bayes_pls_golite062009
  • natural killer cell receptor activity
    		•  3.37843128580346 bayes_pls_golite062009
  • pattern recognition receptor activity
    		•  3.05578915083496 bayes_pls_golite062009
  • molecular transducer activity
    		•  3.03592595048581 bayes_pls_golite062009
  • signal transducer activity
    		•  3.03592595048581 bayes_pls_golite062009
  • carbohydrate binding
    		•  2.63424321036563 bayes_pls_golite062009
  • sugar binding
    		•  2.6025775984581 bayes_pls_golite062009
  • hyaluronic acid binding
    		•  2.58628076450595 bayes_pls_golite062009
  • polysaccharide binding
    		•  2.24233082763179 bayes_pls_golite062009
  • binding
    		•  2.03451078500546 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.97558442517995 bayes_pls_golite062009
  • pattern binding
    		•  1.93929977823971 bayes_pls_golite062009
  • protein binding
    		•  1.92861594281923 bayes_pls_golite062009
  • antigen binding
    		•  1.69692361913389 bayes_pls_golite062009
  • sialic acid binding
    		•  1.36422196085993 bayes_pls_golite062009
  • monosaccharide binding
    		•  1.34519043528668 bayes_pls_golite062009
  • transporter activity
    		•  1.29117376481824 bayes_pls_golite062009
  • peptide antigen binding
    		•  1.21587238898951 bayes_pls_golite062009
  • receptor binding
    		•  0.93169143052074 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.800821600000825 bayes_pls_golite062009
  • lipoprotein binding
    		•  0.737354648946551 bayes_pls_golite062009
    		• 0.683342783917951 bayes_pls_golite062009
  • calcium-dependent protein binding
    		•  0.49027579590148 bayes_pls_golite062009
  • oligosaccharide binding
    		•  0.474565121003139 bayes_pls_golite062009
  • heparin binding
    		•  0.35456250619604 bayes_pls_golite062009
  • fucose binding
    		•  0.34660007137266 bayes_pls_golite062009
  • integrin binding
    		•  0.320664889580961 bayes_pls_golite062009
  • cell surface binding
    		•  0.207412583061837 bayes_pls_golite062009
  • natural killer cell lectin-like receptor binding
    		•  0.204348795793981 bayes_pls_golite062009
  • glycoprotein binding
    		•  0.123147559442533 bayes_pls_golite062009
  • low-density lipoprotein binding
    		•  0.1129292392357 bayes_pls_golite062009
  • catalytic activity
    		•  0.10160549859022 bayes_pls_golite062009
  • growth factor binding
    		•  0.0425815687857338 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle