YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7159330, gi\|6...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPEVTYST VRFHKSSGLQ KLVRHEETQG PREAGNRKCS VSWQLIVKAL GILCFLLLVI  60
   61 VAVLTIKIFQ YSQHKQEINE TLNHHHNCSN MQRDFNLKEE MLTNKSIDCR PSNEILEYIK 120
  121 REQDRWDSET KTVLDSSRDT GRGVKYWFCY GTKCYYFIMN KTTWSGCKAN CQHYSVPIVK 180
  181 IEDEDELKFL QRHVIPEGYW IGLSYDKKKK EWAWIDNGPS KFDMKIRKMN FKSRGCVFLS 240
  241 KARIEDTDCN IPYYCICGKK LDKFPD

Type	Start	End	Confidence
Cytoplasmic	1	44	0.95
Transmembrane Helix	45	66	0.92
Non-Cytoplasmic	67	266	0.96