| Protein: | gi|7159330, gi|6... |
| Organism: | Mus musculus |
| Length: | 266 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7159330, gi|6....
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..1] | [266..1] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MSEPEVTYST VRFHKSSGLQ KLVRHEETQG PREAGNRKCS VSWQLIVKAL GILCFLLLVI 60
61 VAVLTIKIFQ YSQHKQEINE TLNHHHNCSN MQRDFNLKEE MLTNKSIDCR PSNEILEYIK 120
121 REQDRWDSET KTVLDSSRDT G
|
| Detection Method: |  |
| Confidence: | 58.455932 |
| Match: | PF08391.1 |
| Description: | No description for PF08391.1 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-266] |
1 11 21 31 41 51
| | | | | |
1 RGVKYWFCYG TKCYYFIMNK TTWSGCKANC QHYSVPIVKI EDEDELKFLQ RHVIPEGYWI 60
61 GLSYDKKKKE WAWIDNGPSK FDMKIRKMNF KSRGCVFLSK ARIEDTDCNI PYYCICGKKL 120
121 DKFPD
|
| Detection Method: | |
| Confidence: | 25.0 |
| Match: | 1ja3A |
| Description: | NK cell receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| zymosan binding | 6.19709531947955 | bayes_pls_golite062009 |
| polysaccharide receptor activity | 4.47886057498833 | bayes_pls_golite062009 |
| zymosan receptor activity | 4.47886057498833 | bayes_pls_golite062009 |
| receptor activity | 3.98996960244405 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.91893667918626 | bayes_pls_golite062009 |
| MHC class Ib receptor activity | 3.61992868801251 | bayes_pls_golite062009 |
| natural killer cell receptor activity | 3.37843128580346 | bayes_pls_golite062009 |
| pattern recognition receptor activity | 3.05578915083496 | bayes_pls_golite062009 |
| molecular transducer activity | 3.03592595048581 | bayes_pls_golite062009 |
| signal transducer activity | 3.03592595048581 | bayes_pls_golite062009 |
| carbohydrate binding | 2.63424321036563 | bayes_pls_golite062009 |
| sugar binding | 2.6025775984581 | bayes_pls_golite062009 |
| hyaluronic acid binding | 2.58628076450595 | bayes_pls_golite062009 |
| polysaccharide binding | 2.24233082763179 | bayes_pls_golite062009 |
| binding | 2.03451078500546 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.97558442517995 | bayes_pls_golite062009 |
| pattern binding | 1.93929977823971 | bayes_pls_golite062009 |
| protein binding | 1.92861594281923 | bayes_pls_golite062009 |
| antigen binding | 1.69692361913389 | bayes_pls_golite062009 |
| sialic acid binding | 1.36422196085993 | bayes_pls_golite062009 |
| monosaccharide binding | 1.34519043528668 | bayes_pls_golite062009 |
| transporter activity | 1.29117376481824 | bayes_pls_golite062009 |
| peptide antigen binding | 1.21587238898951 | bayes_pls_golite062009 |
| receptor binding | 0.93169143052074 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.800821600000825 | bayes_pls_golite062009 |
| lipoprotein binding | 0.737354648946551 | bayes_pls_golite062009 |
| 0.683342783917951 | bayes_pls_golite062009 | |
| calcium-dependent protein binding | 0.49027579590148 | bayes_pls_golite062009 |
| oligosaccharide binding | 0.474565121003139 | bayes_pls_golite062009 |
| heparin binding | 0.35456250619604 | bayes_pls_golite062009 |
| fucose binding | 0.34660007137266 | bayes_pls_golite062009 |
| integrin binding | 0.320664889580961 | bayes_pls_golite062009 |
| cell surface binding | 0.207412583061837 | bayes_pls_golite062009 |
| natural killer cell lectin-like receptor binding | 0.204348795793981 | bayes_pls_golite062009 |
| glycoprotein binding | 0.123147559442533 | bayes_pls_golite062009 |
| low-density lipoprotein binding | 0.1129292392357 | bayes_pls_golite062009 |
| catalytic activity | 0.10160549859022 | bayes_pls_golite062009 |
| growth factor binding | 0.0425815687857338 | bayes_pls_golite062009 |
