Protein Overview: DHX30

General Information:
Name(s) found:	DHX30 [HGNC (HUGO)]
Description(s) found: SHOW ONLY BEST	gi\|74758997\|sp\|Q7L2E3.1\|DHX30_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName: Full=DEAH box protein 30 [NCBI NR] gi\|20336294\|ref\|NP_619520.1\| DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 [Homo sapiens] [NCBI NR] gi\|18043040\|gb\|AAH20126.1\| DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Homo sapiens] [NCBI NR] gi\|119585239\|gb\|EAW64835.1\| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Homo sapiens] [NCBI NR] gi\|119585238\|gb\|EAW64834.1\| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Homo sapiens] [NCBI NR] DEAH (Asp-Glu-Ala-His) box polypeptide 30 [HGNC (HUGO)] Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30 PE=1 SV=1 [Swiss-Prot] Hypothetical protein KIAA0890 [hmr_yeast5_DM3-1_pombe.fasta] DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 30 [HMR_022704.fasta] DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 [Homo sapiens]gi\|18043040\|gb\|AAH20126.1\| DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform 1 [Homo sapiens] [nrdb_11152004_Chlamydomonas] Tax_Id=9606 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta] (NM_138615) DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 30, isoform 1 [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta] Tax_Id=9606 DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform 1 [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta] DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 30 [Homo sapiens] [HumanGallus06162005.fasta] Putative ATP-dependent RNA helicase DHX30 (DEAH box protein 30) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta] DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta] DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta] Tax_Id=9606 Putative ATP-dependent RNA helicase DHX30 [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta] Tax_Id=9606 DEAH (ASP-GLU-ALA-HIS) BOX POLYPEPTIDE 30, ISOFORM 1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=9606 Gene_Symbol=DHX30 Isoform 1 of Putative ATP-dependent RNA helicase DHX30 [human-ipi-250309-contam.fasta] IPI:IPI00411733.4\|SWISS-PROT:Q7L2E3-1\|ENSEMBL:ENSP00000392601;ENSP00000405620\|REFSEQ:NP_619520\|VEGA:OTTHUMP00000164802;OTTHUMP00000170985 Tax_Id=9606 Gene_Symbol=DHX30 Isoform 1 of Putative ATP-dependent RNA helicase DHX30 [ipi.HUMAN.fasta.20090807] Tax_Id=9606 Isoform 1 of Putative ATP-dependent RNA helicase DHX30 [IPI_human_3.26.fasta] [human_BMb_040710_contam.fasta] Tax_Id=9606 Gene_Symbol=DHX30 Isoform 1 of Putative ATP-dependent RNA helicase DHX30 ENSG00000132153 IPI00164906 IPI00411733 IPI00477295 IPI00792102 IPI00795005 IPI00793739 [drosphohumanreversed.fasta] putative ATP-dependent RNA helicase DHX30 isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] Q7L2E3;A8K5F1;O94965;Q7Z753;Q96CH4;Q9NUQ0; RecName: Full=Putative ATP-dependent RNA helicase DHX30; AltName: Full=DEAH box protein 30; [UniProt_Human_2010_06_06-01-2010_reversed.fasta] Isoform 1 of Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30 [011711_HMR.fasta] GeneSymbol=DHX30 Synonyms=DDX30\|FLJ11214\|KIAA0890\|RETCOR putative ATP-dependent RNA helicase DHX30 isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta] IPI:IPI00411733.4\|SWISS-PROT:Q7L2E3-1\|ENSEMBL:ENSP00000405620\|REFSEQ:NP_619520\|VEGA:OTTHUMP00000164802 Tax_Id=9606 Gene_Symbol=DHX30 Isoform 1 of Putative ATP-dependent RNA helicase DHX30 [ipi.HUMAN.20110912.fasta] Putative ATP-dependent RNA helicase DHX30 GN=DHX30 [Doctor+uniprot-HUMAN-120911.fasta] DEAH (Asp-Glu-Ala-His) box polypeptide 30, isoform CRA_b OS=Homo sapiens GN=DHX30 PE=4 SV=1 [uniprot-human-031015-contam.fasta]
Organism:	Homo sapiens
Length:	1194 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLDSFRKD RAQHRQRQCK LPPPRLPPMC VNPTPGGTIS RASRDLLKEF PQPKNLLNSV  60
   61 IGRALGISHA KDKLVYVHTN GPKKKKVTLH IKWPKSVEVE GYGSKKIDAE RQAAAAACQL 120
  121 FKGWGLLGPR NELFDAAKYR VLADRFGSPA DSWWRPEPTM PPTSWRQLNP ESIRPGGPGG 180
  181 LSRSLGREEE EDEEEELEEG TIDVTDFLSM TQQDSHAPLR DSRGSSFEMT DDDSAIRALT 240
  241 QFPLPKNLLA KVIQIATSSS TAKNLMQFHT VGTKTKLSTL TLLWPCPMTF VAKGRRKAEA 300
  301 ENKAAALACK KLKSLGLVDR NNEPLTHAMY NLASLRELGE TQRRPCTIQV PEPILRKIET 360
  361 FLNHYPVESS WIAPELRLQS DDILPLGKDS GPLSDPITGK PYVPLLEAEE VRLSQSLLEL 420
  421 WRRRGPVWQE APQLPVDPHR DTILNAIEQH PVVVISGDTG CGKTTRIPQL LLERYVTEGR 480
  481 GARCNVIITQ PRRISAVSVA QRVSHELGPS LRRNVGFQVR LESKPPSRGG ALLFCTVGIL 540
  541 LRKLQSNPSL EGVSHVIVDE VHERDVNTDF LLILLKGLQR LNPALRLVLM SATGDNERFS 600
  601 RYFGGCPVIK VPGFMYPVKE HYLEDILAKL GKHQYLHRHR HHESEDECAL DLDLVTDLVL 660
  661 HIDARGEPGG ILCFLPGWQE IKGVQQRLQE ALGMHESKYL ILPVHSNIPM MDQKAIFQQP 720
  721 PVGVRKIVLA TNIAETSITI NDIVHVVDSG LHKEERYDLK TKVSCLETVW VSRANVIQRR 780
  781 GRAGRCQSGF AYHLFPRSRL EKMVPFQVPE ILRTPLENLV LQAKIHMPEK TAVEFLSKAV 840
  841 DSPNIKAVDE AVILLQEIGV LDQREYLTTL GQRLAHISTD PRLAKAIVLA AIFRCLHPLL 900
  901 VVVSCLTRDP FSSSLQNRAE VDKVKALLSH DSGSDHLAFV RAVAGWEEVL RWQDRSSREN 960
  961 YLEENLLYAP SLRFIHGLIK QFSENIYEAF LVGKPSDCTL ASAQCNEYSE EEELVKGVLM1020
 1021 AGLYPNLIQV RQGKVTRQGK FKPNSVTYRT KSGNILLHKS TINREATRLR SRWLTYFMAV1080
 1081 KSNGSVFVRD SSQVHPLAVL LLTDGDVHIR DDGRRATISL SDSDLLRLEG DSRTVRLLKE1140
 1141 LRRALGRMVE RSLRSELAAL PPSVQEEHGQ LLALLAELLR GPCGSFDVRK TADD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	gi\|14317902, gi\|...	No Comments	Cheeseman, I.M., et al. (2004)
View Run	MIS12	No Comments	Cheeseman, I.M., et al. (2004)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..221]	PSI-BLAST	39.69897	No description for 2db2A was found.
2	View Details	[222..340]	FFAS03	5.37	No description for 2db2A was found.
3	View Details	[341..404]	deduced	N/A	No confident structure predictions are available.
4	View Details	[405..1034]	PSI-BLAST	38.69897	No description for 2p6rA was found.
5	View Details	[1035..1194]	MSA	2.542976	View MSA. No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: DHX30

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: