| Protein: | DHX30 |
| Organism: | Homo sapiens |
| Length: | 1194 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DHX30.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1194] | [17..1210] |
|
|
0.0 | [1..1194] | [1..1194] |
|
|
0.0 | [1..1194] | [24..1217] |
|
|
0.0 | [1..1194] | [1..1194] |
|
|
0.0 | [1..1194] | [1..1194] |
|
|
0.0 | [1..1194] | [1..1194] |
|
|
0.0 | [1..1194] | [1..1194] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MFSLDSFRKD RAQHRQRQCK LPPPRLPPMC VNPTPGGTIS RASRDLLKEF PQPKNLLNSV 60
61 IGRALGISHA KDKLVYVHTN GPKKKKVTLH IKWPKSVEVE GYGSKKIDAE RQAAAAACQL 120
121 FKGWGLLGPR NELFDAAKYR VLADRFGSPA DSWWRPEPTM PPTSWRQLNP ESIRPGGPGG 180
181 LSRSLGREEE EDEEEELEEG TIDVTDFLSM TQQDSHAPLR D
|
| Detection Method: |  |
| Confidence: | 39.69897 |
| Match: | 2db2A |
| Description: | No description for 2db2A was found. |
|
Region A: Residues: [222-340] |
1 11 21 31 41 51
| | | | | |
1 SRGSSFEMTD DDSAIRALTQ FPLPKNLLAK VIQIATSSST AKNLMQFHTV GTKTKLSTLT 60
61 LLWPCPMTFV AKGRRKAEAE NKAAALACKK LKSLGLVDRN NEPLTHAMYN LASLRELGE
|
| Detection Method: | |
| Confidence: | 5.37 |
| Match: | 2db2A |
| Description: | No description for 2db2A was found. |
|
Region A: Residues: [341-404] |
1 11 21 31 41 51
| | | | | |
1 TQRRPCTIQV PEPILRKIET FLNHYPVESS WIAPELRLQS DDILPLGKDS GPLSDPITGK 60
61 PYVP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [405-1034] |
1 11 21 31 41 51
| | | | | |
1 LLEAEEVRLS QSLLELWRRR GPVWQEAPQL PVDPHRDTIL NAIEQHPVVV ISGDTGCGKT 60
61 TRIPQLLLER YVTEGRGARC NVIITQPRRI SAVSVAQRVS HELGPSLRRN VGFQVRLESK 120
121 PPSRGGALLF CTVGILLRKL QSNPSLEGVS HVIVDEVHER DVNTDFLLIL LKGLQRLNPA 180
181 LRLVLMSATG DNERFSRYFG GCPVIKVPGF MYPVKEHYLE DILAKLGKHQ YLHRHRHHES 240
241 EDECALDLDL VTDLVLHIDA RGEPGGILCF LPGWQEIKGV QQRLQEALGM HESKYLILPV 300
301 HSNIPMMDQK AIFQQPPVGV RKIVLATNIA ETSITINDIV HVVDSGLHKE ERYDLKTKVS 360
361 CLETVWVSRA NVIQRRGRAG RCQSGFAYHL FPRSRLEKMV PFQVPEILRT PLENLVLQAK 420
421 IHMPEKTAVE FLSKAVDSPN IKAVDEAVIL LQEIGVLDQR EYLTTLGQRL AHISTDPRLA 480
481 KAIVLAAIFR CLHPLLVVVS CLTRDPFSSS LQNRAEVDKV KALLSHDSGS DHLAFVRAVA 540
541 GWEEVLRWQD RSSRENYLEE NLLYAPSLRF IHGLIKQFSE NIYEAFLVGK PSDCTLASAQ 600
601 CNEYSEEEEL VKGVLMAGLY PNLIQVRQGK
|
| Detection Method: | |
| Confidence: | 38.69897 |
| Match: | 2p6rA |
| Description: | No description for 2p6rA was found. |
| Term | Confidence | Notes |
| 4.704140727858 | bayes_pls_golite062009 | |
| binding | 2.4974940028864 | bayes_pls_golite062009 |
| RNA binding | 2.29590582680214 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.57653963868443 | bayes_pls_golite062009 |
| RNA helicase activity | 1.42791449104435 | bayes_pls_golite062009 |
| nucleic acid binding | 1.41477043612798 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.39335733374328 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.36724390116598 | bayes_pls_golite062009 |
| DNA binding | 1.11699929651302 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| transcription regulator activity | 0.989226939888218 | bayes_pls_golite062009 |
| hydrolase activity | 0.770112659770838 | bayes_pls_golite062009 |
| mRNA binding | 0.76699944561918 | bayes_pls_golite062009 |
| helicase activity | 0.6191010101321 | bayes_pls_golite062009 |
| structural molecule activity | 0.596382945962261 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.461763181659193 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.458831409927227 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.455976987338331 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.422944846459286 | bayes_pls_golite062009 |
| snRNA binding | 0.418985924846052 | bayes_pls_golite062009 |
| protein binding | 0.378225828131122 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.29664013896754 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.29664013896754 | bayes_pls_golite062009 |
| translation release factor activity | 0.178286731022211 | bayes_pls_golite062009 |
| translation termination factor activity | 0.151456842619444 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| transcription factor activity | 0.0434163635422169 | bayes_pls_golite062009 |
|
Region A: Residues: [1035-1194] |
1 11 21 31 41 51
| | | | | |
1 VTRQGKFKPN SVTYRTKSGN ILLHKSTINR EATRLRSRWL TYFMAVKSNG SVFVRDSSQV 60
61 HPLAVLLLTD GDVHIRDDGR RATISLSDSD LLRLEGDSRT VRLLKELRRA LGRMVERSLR 120
121 SELAALPPSV QEEHGQLLAL LAELLRGPCG SFDVRKTADD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
