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Protein Overview: YBR074W

General Information:
Name(s) found: YBR074W [SGD]
Description(s) found:
Found 14 descriptions.
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  • Putative metalloprotease [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 976 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKSVFRSV LKYRKTNLSL LLLITYSIIT LLYIFDHERY KLNLPKEDEH PEFNDLLETA  60
   61 WGDLQIITAS FHPYTSKEND KVHDYLLKRV LEITGNSSFA SVSDDKESER SILFQQQDPF 120
  121 NESSRFSRVT YFESSNILVK LEGKNPEEEG LLLSAHFDSV PTGYGATDDG MGVVSLLANL 180
  181 KYHIKHRPNR TLIFNFNNNE EFGLLGASTY FDHSWSNLTK YVINLEGTGA GGKAVLFRTS 240
  241 DTSTARIYQQ SVKENPFGNS IYQQGFYSRY VRSETDYKIY EENGMRGWDV AFYKPRNLYH 300
  301 TIKDSIQYTS KASLWHMLHT SLQLSAYVAS NSLDTADQTP ACYFDFIGLK FFVISAKTLF 360
  361 YWNCIFLLVS PVVAIGLYLI SRDRMTWKSY SWLSWTRFPL SLAAGIIVQK LFSNDIIRSN 420
  421 PLTFSRNYFW PISAFFTQVI FTSYVLINCS NFFFPCADMK SLSIIELFII LWTILLFTSK 480
  481 LLYSSDYRYT GLYPLSIFFL LSTIAAILRL LALALGMRTR KRLGRECRDH HSNYSSHSQI 540
  541 DMERDGQENL EQPQDQLTSS QDDQASIQDD NVSTTSAGPS HNVDEDHGMD SSSQQHDERV 600
  601 PLLKGSNSME EGLSTRENSL KLEYTDYAWI IQFLLIVPIP SFILFNSVDV IMDALNHTVQ 660
  661 EGSKATFDVL RFGMVGSILI ALPILPFFYK VNYITISLTA LLFLISASKT LLVHPFTNSN 720
  721 PLKVRFSQNI DLSQGNAASV HVLGREGNFL KPMLQDLPSI KYSSTHINCT SVTNGMELCM 780
  781 YDGMQPNLLS TNGNTNISSM VKVHVLHNNR NSTERSPYEP IVAELLLEVK EFRACTLTFE 840
  841 SRHQAKSPVR EITVYQKKNS APQKANITKT IKSASGINEL QLHKLDFDQE TYHIGVQWFP 900
  901 KLLTDGNVED DKLGTKDELS VSISCYWGEY DSESVVNGTA VRKIPAFDEL INYAPLSFSF 960
  961 TNEQKGLVIV KDAIIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] PSI-BLAST 39.0 No description for 2ootA was found.
    2 View Details [353..527] MSA 2.104989 View MSA. No confident structure predictions are available.
    3 View Details [528..594] deduced N/A No confident structure predictions are available.
    4 View Details [595..636] MSA 1.021996 View MSA. No confident structure predictions are available.
    5 View Details [637..782] MSA 1.019983 View MSA. No confident structure predictions are available.
    6 View Details [783..976] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.3989281287879 bayes_pls_golite062009
  • peptidase activity
    		•  1.27773768680798 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.04982326392292 bayes_pls_golite062009
  • binding
    		•  0.427430529570567 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.292505428315311 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.288706193625513 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.262148955584626 bayes_pls_golite062009
  • DNA binding
    		•  0.106664548435924 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle