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Protein Overview: IBD2

General Information:
Name(s) found: IBD2 / YNL164C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Component of the BUB2-dependent spindle checkpoint pathway, interacts with Bfa1p and functions upstream of Bub2p and Bfa1p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: nucleus [NASLink to PubMed article]
    Biological Process: mitotic cell cycle spindle assembly checkpoint [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPTNQSSGT TNASVEVLSE DGPMPINVMM QEGVKALTKI LSNQLQDRQA FQNAPHAMQF  60
   61 VIRNGGKALS NARLEELKDA LPKMDSLSLE DELAKIDGQS AYHIDSAEEK ETFESKIGQI 120
  121 ASRNSADFII EEDLQNILDD DLKDSELNLD GEEAEIIFDY ESQELDTPDG IGEKISQMIE 180
  181 SVLPGGFGSE EQGGLRTVTN VEDLDVAEEV TDIDHDTVDA ARLHGDGQHS ISSRKHSRSK 240
  241 NSKKNGHVRR HDFYDESRDH KSCCPHHHYE NLSKLRNYYY HDFEYISRTE NRVPDFSVLV 300
  301 NESSPMCLFC EYYMVFGEPP RNMIKWYNRT FGYNRMPNPP RDEQDSRKRN R

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) DOT6 IBD2 NST1 YKL075C YOL159C-A

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data IBD2 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..351] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle