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Protein Overview: YIP3

General Information:
Name(s) found: YIP3 / YNL044W [SGD]
Description(s) found:
Found 28 descriptions.
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  • Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 176 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    ER to Golgi transport vesicle [IDALink to PubMed article]
    Biological Process: ER to Golgi vesicle-mediated transport [IPILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQLGALAQV SRFTQNFSME NIKSEFQSLQ SKLATLRTPQ EFFNFKKISK PQNFGEVQSR  60
   61 VAYNLKYFSS NYGLIIGCLS IYTLLTNLLL LFVIVLVVAG IVGINKLKGE ELVTPFGSFK 120
  121 TNQLYTGLVC VAVPIGFLAS PISTLLWLIG ASAVSVFGHA SLMEKPIETV FDEETV

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) RGP1 RIC1 SYG1 YIP3
    View Details Qiu et al. (2008) EMP24 ERP1 SEC22 YIP3 YOS1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YPT31 YIP3 2 Unpublished Fields Lab Data
    View Screen YIF1 YIP3 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YIP3 and ANP1 Huh WK, et al. (2003)
    View Data YIP3 Huh WK, et al. (2003)
    View Data YIP3 and COP1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] Pfam 82.823909 PRA1 family protein No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle