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Protein Overview: YMR102C

General Information:
Name(s) found: YMR102C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Protein of unknown function; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; mutant shows increased resistance to azoles; YMR102C is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 834 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNMAEDKTS ISKVHSEFSN SSNTTGSEEE SRSHQESFDG ESSSGESKSK SKLNLEYSAD  60
   61 IEPLKFRMTK TNNTNDKLKY SNNGNATDSF MRLKEHLQRG NTLNSNLRVN EFYPFNSIDT 120
  121 EQFENYLREP KYIKMLKRRK NLKQFRRLFL AQELMAYEGE TVTSTSKSSE PTSKAIWSTK 180
  181 FSRDGKFMAT GSKDGKIRIW KVIGSPVERA ELDSSAESNK EARAKSMRIK QQVSSLNNPK 240
  241 EKQFLDSATE KYEEKEKLLN LYAPVFHPTP LRLYKEHVQD VLDINWSKNN FILSASMDKT 300
  301 VKLWHPDRKN SLKTFIHPDF VTCVEFHPTD DRFFISGCLD HKCRLWSILD DEVSFEYDCQ 360
  361 DLITSVTLSP EEGKYTIIGT FNGYVHILMT RGLTPVSSFH VADRQTQEQN AHVMVTETDS 420
  421 KIRHGPRVTG LQAFRSQLDN SFRLVVTSND SRIRIFDLEQ RKLLEVLKGF HSGSSQHKAQ 480
  481 LSIWHGQPIV VNSSDDHWVY GWRLKSSDRE NDQDEPKRKP KGLARSGSLR SIFSKSMSRS 540
  541 SSQNNEEKPH HHLKLTNLLP LPHHSNDHYI KNTDYISFHA HNAPVTCVSI APPETSKTLS 600
  601 LSNDVICELS LEFFQTSDSF DVLSRSNDDG IMSDVESSLG YNSKPGSISN ASATSAIPDV 660
  661 VDAIGTILIS TDNVGTIRVF RADMPSVIRK RVLLKLEEYN REVRRRFNSS DSLHSLSRSF 720
  721 NSRAKSNLAG QPAAAYTNTG KGYATGRGYS NICPKSSTSL KTLGSNAQPR TPRESMSSIF 780
  781 SNAHGPTTPT SAMNLPIRCN VCNGSRFEAF SGANDQQDRN YYCVDCGTVV NNFR

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) MED4 YMR102C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YMR102C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 18.0 Arp2/3 complex 41 kDa subunit ARPC1
    2 View Details [164..506] PSI-BLAST 126.274545 Tup1, C-terminal domain
    3 View Details [507..624] PSI-BLAST 2.045757 TolB, C-terminal domain; TolB, N-terminal domain
    4 View Details [625..834] MSA 4.405996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.970443812790272 bayes_pls_golite062009
  • protein binding
    		•  0.710864315918406 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle