Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR102C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [27..697] | [865..1491] |
|
|
0.0 | [12..593] | [820..1314] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MTNMAEDKTS ISKVHSEFSN SSNTTGSEEE SRSHQESFDG ESSSGESKSK SKLNLEYSAD 60
61 IEPLKFRMTK TNNTNDKLKY SNNGNATDSF MRLKEHLQRG NTLNSNLRVN EFYPFNSIDT 120
121 EQFENYLREP KYIKMLKRRK NLKQFRRLFL AQELMAYEGE TVT
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1k8kC_ |
| Description: | Arp2/3 complex 41 kDa subunit ARPC1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [164-506] |
1 11 21 31 41 51
| | | | | |
1 STSKSSEPTS KAIWSTKFSR DGKFMATGSK DGKIRIWKVI GSPVERAELD SSAESNKEAR 60
61 AKSMRIKQQV SSLNNPKEKQ FLDSATEKYE EKEKLLNLYA PVFHPTPLRL YKEHVQDVLD 120
121 INWSKNNFIL SASMDKTVKL WHPDRKNSLK TFIHPDFVTC VEFHPTDDRF FISGCLDHKC 180
181 RLWSILDDEV SFEYDCQDLI TSVTLSPEEG KYTIIGTFNG YVHILMTRGL TPVSSFHVAD 240
241 RQTQEQNAHV MVTETDSKIR HGPRVTGLQA FRSQLDNSFR LVVTSNDSRI RIFDLEQRKL 300
301 LEVLKGFHSG SSQHKAQLSI WHGQPIVVNS SDDHWVYGWR LKS
|
| Detection Method: | |
| Confidence: | 126.274545 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.970443812790272 | bayes_pls_golite062009 |
| protein binding | 0.710864315918406 | bayes_pls_golite062009 |
|
Region A: Residues: [507-624] |
1 11 21 31 41 51
| | | | | |
1 SDRENDQDEP KRKPKGLARS GSLRSIFSKS MSRSSSQNNE EKPHHHLKLT NLLPLPHHSN 60
61 DHYIKNTDYI SFHAHNAPVT CVSIAPPETS KTLSLSNDVI CELSLEFFQT SDSFDVLS
|
| Detection Method: | |
| Confidence: | 2.045757 |
| Match: | 1crzA_ |
| Description: | TolB, C-terminal domain; TolB, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [625-834] |
1 11 21 31 41 51
| | | | | |
1 RSNDDGIMSD VESSLGYNSK PGSISNASAT SAIPDVVDAI GTILISTDNV GTIRVFRADM 60
61 PSVIRKRVLL KLEEYNREVR RRFNSSDSLH SLSRSFNSRA KSNLAGQPAA AYTNTGKGYA 120
121 TGRGYSNICP KSSTSLKTLG SNAQPRTPRE SMSSIFSNAH GPTTPTSAMN LPIRCNVCNG 180
181 SRFEAFSGAN DQQDRNYYCV DCGTVVNNFR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
