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Protein Overview: YMR027W

General Information:
Name(s) found: YMR027W [SGD]
Description(s) found:
Found 22 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; YMR027W is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 470 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIPGRFMTI DKGTFGEYTA STRWPIIIQN AIDDLSKHQE TEKSNGTKFE QGEVIKKELK  60
   61 EFRQEIIDRV PLRPFTEEEI KIANVPLSFN EYLKKHPEVN WGAVEWLFSE VYLYRRVNVL 120
  121 FQRQCEWAKF DIFNRLKQST FESSFYGVVE LALRYENLLP QLREMKQNPG NEIDDILKVL 180
  181 FKEFIEISLW GNATDLSLLT NATLEDIKSI QGAKARAASE SKIVVNDTEK AWEVLTKARA 240
  241 DANSREIRVD FVLDNSGFEL YADLMLAAFL LQSGLATKCI FHAKDIPYMV SDVMLKDFDI 300
  301 LVHDLRDREF FPSGEPSTKE SRALDLFAGE MEKFVSSGKI EFREDSFWTT ELDYWNLDAN 360
  361 ETKYHGSILH KDLQKSNLVI FKGDLNYRKL TGDRKWPRTT KWETAIGPLA TNGITSLSLR 420
  421 TCKADVQVAL PEGLDAKLSQ EWEKENPGRG SWWCCSGKWA VICFCSGIHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YMR027W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] MSA 1.013959 View MSA. Confident ab initio structure predictions are available.
    2 View Details [131..199] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [200..470] MSA 1.013918 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle