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View Structure Prediction Details

Protein: YMR027W
Organism: Saccharomyces cerevisiae
Length: 470 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR027W.

Description E-value Query
Range
Subject
Range
ARMT1_YEAST - Protein-glutamate O-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YM...
YMR027W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..470] [1..470]
C6orf211 - chromosome 6 open reading frame 211
0.0 [3..464] [4..437]
ART1B_SCHPO - Protein-glutamate O-methyltransferase C1393.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...
SPCC1393.13 - DUF89 family protein
0.0 [8..465] [14..439]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [8..465] [1..426]
gi|220942874, gi... - gi|220953058|gb|ACL89072.1| CG11474-PA [synthetic construct], gi|220942874|gb|ACL83980.1| CG11474-PA...
FBpp0292778, CG1... - This gene is referred to in FlyBase by the symbol Dmel\CG11474 (CG11474, FBgn0034688). It is a prote...
0.0 [11..466] [28..435]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIPGRFMTI DKGTFGEYTA STRWPIIIQN AIDDLSKHQE TEKSNGTKFE QGEVIKKELK  60
   61 EFRQEIIDRV PLRPFTEEEI KIANVPLSFN EYLKKHPEVN WGAVEWLFSE VYLYRRVNVL 120
  121 FQRQCEWAKF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.859 0.236 cytoplasm a.45.1 Glutathione S-transferase (GST), C-terminal domain

Predicted Domain #2
Region A:
Residues: [131-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIFNRLKQST FESSFYGVVE LALRYENLLP QLREMKQNPG NEIDDILKVL FKEFIEISLW  60
   61 GNATDLSLL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.932 0.348 nucleus a.7.7 BAG domain

Predicted Domain #3
Region A:
Residues: [200-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNATLEDIKS IQGAKARAAS ESKIVVNDTE KAWEVLTKAR ADANSREIRV DFVLDNSGFE  60
   61 LYADLMLAAF LLQSGLATKC IFHAKDIPYM VSDVMLKDFD ILVHDLRDRE FFPSGEPSTK 120
  121 ESRALDLFAG EMEKFVSSGK IEFREDSFWT TELDYWNLDA NETKYHGSIL HKDLQKSNLV 180
  181 IFKGDLNYRK LTGDRKWPRT TKWETAIGPL ATNGITSLSL RTCKADVQVA LPEGLDAKLS 240
  241 QEWEKENPGR GSWWCCSGKW AVICFCSGIH K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle